Parental gene:

TMEM50B, ENSPTRG00000013869

Aliases:None
Description:Pan troglodytes transmembrane protein 50B (TMEM50B), mRNA. [Source:RefSeq mRNA;Acc:NM_001246571]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:21:19548939..19588176(-)


>ENSPTRG00000013869
ATGGCAGGCTTCCTAGATAATTTTCGTTGGCCAGAATGTGAATGTATTGACTGGAGTGAGAGAAGAAATGCTGTGGCATC
TGTTGTCGCAGGTATATTGTTTTTTACAGGCTGGTGGATAATGATTGATGCAGCTGTGGTGTATCCTAAGCCAGAACAGT
TGAACCATGCCTTTCACACATGTGGTGTATTTTCCACATTGGCTTTCTTCATGATAAATGCTGTATCCAATGCTCAGGTG
AGAGGTGATAGCTATGAAAGCGGCTGTTTAGGAAGAACAGGTGCTCGAGTTTGGCTTTTCATTGGTTTCATGTTGATGTT
TGGGTCACTTATTGCTTCCATGTGGATTCTTTTTGGTGCATATGTTACCCAAAATACTGATGTTTATCCGGGACTAGCTG
TGTTTTTTCAAAATGCACTTATATTTTTTAGCACTCTGATCTACAAATTTGGAAGAACCGAAGAGCTATGGACCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 14 .14 RPM
SRP007412_cerebellum 34 .02 RPM
SRP007412_heart 15 .16 RPM
SRP007412_kidney 24 .95 RPM
SRP007412_liver 11 .36 RPM
SRP007412_testis 50 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003928 ortholog_one2one 1 retrogene
retro_chof_422,
Gorilla gorilla ENSGGOG00000034844 ortholog_one2one 1 retrogene
retro_ggor_1487,
Myotis lucifugus ENSMLUG00000012388 ortholog_one2one 1 retrogene
retro_mluc_970,
Nomascus leucogenys ENSNLEG00000003887 ortholog_one2one 1 retrogene
retro_nleu_2077,
Ictidomys tridecemlineatus ENSSTOG00000023740 ortholog_one2one 1 retrogene
retro_itri_678,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1379 85.05 67.09
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Download FASTA sequences of all ENSPTRG00000013869 retrocopies