Parental gene: | METTL5, ENSPTRG00000012621 |
| Aliases: | None |
| Description: | methyltransferase like 5 [Source:HGNC Symbol;Acc:25006] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 2B:174224646..174237866(-) |
>ENSPTRG00000012621
ATGAAGAAAGTAAGGCTTAAGGAACTAGAGAGTCGCCTGCAACAAGTGGATGGATTTGAAAAGCCCAAGCTACTTCTAGA
ACAGTATCCTACCAGGCCGCACATTGCAGCATGTATGCTCTATACAATCCATAACACTTATGATGACATTGAAAATAAAG
TCGTTGCAGATCTAGGATGTGGTTGTGGAGTACTTAGCATCGGAACTGCAATGTTAGGAGCAGGGTTGTGTGTTGGATTT
GACATAGATGAAGACGCATTGGAAATATTTAATAGGAATGCAGAAGAGTTTGAGTTAACAAATATTGACATGGTTCAATG
TGATGTGTGCTTATTATCTAACAGAATGTCCAAGTCATTCGATACAGTAATTATGAATCCTCCCTTTGGGACCAAAAATA
ATAAAGGGACAGATATGGCTTTTCTAAAGACTGCTTTGGAAATGGCAAGAACAGCAGTATATTCCTTACACAAATCCTCA
ACTAGAGAACATGTTCAAAAGAAAGCTGCAGAATGGAAAATCAAGATAGATATTATAGCAGAACTTCGATATGACCTGCC
AGCATCATACAAGTTTCACAAAAAGAAATCAGTGGACATTGAAGTGGACCTAATTCGGTTTTCCTTTTAA
ATGAAGAAAGTAAGGCTTAAGGAACTAGAGAGTCGCCTGCAACAAGTGGATGGATTTGAAAAGCCCAAGCTACTTCTAGA
ACAGTATCCTACCAGGCCGCACATTGCAGCATGTATGCTCTATACAATCCATAACACTTATGATGACATTGAAAATAAAG
TCGTTGCAGATCTAGGATGTGGTTGTGGAGTACTTAGCATCGGAACTGCAATGTTAGGAGCAGGGTTGTGTGTTGGATTT
GACATAGATGAAGACGCATTGGAAATATTTAATAGGAATGCAGAAGAGTTTGAGTTAACAAATATTGACATGGTTCAATG
TGATGTGTGCTTATTATCTAACAGAATGTCCAAGTCATTCGATACAGTAATTATGAATCCTCCCTTTGGGACCAAAAATA
ATAAAGGGACAGATATGGCTTTTCTAAAGACTGCTTTGGAAATGGCAAGAACAGCAGTATATTCCTTACACAAATCCTCA
ACTAGAGAACATGTTCAAAAGAAAGCTGCAGAATGGAAAATCAAGATAGATATTATAGCAGAACTTCGATATGACCTGCC
AGCATCATACAAGTTTCACAAAAAGAAATCAGTGGACATTGAAGTGGACCTAATTCGGTTTTCCTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .84 RPM |
| SRP007412_cerebellum | 3 .41 RPM |
| SRP007412_heart | 11 .16 RPM |
| SRP007412_kidney | 9 .68 RPM |
| SRP007412_liver | 4 .88 RPM |
| SRP007412_testis | 10 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000003343 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013460 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000138382 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000022484 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000018044 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000023054 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005018 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010405 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012916 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_938 | 78.65 | 90.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1822 | 77.69 | 57.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2062 | 63.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000012621 retrocopies