Parental gene: | RALBP1, ENSPTRG00000009859 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 18:7051491..7114270(-) |
>ENSPTRG00000009859
ATGACTGAGTGCTTCCTGCCCCCCACCAGCAGCCCCAGTGAACACCGCAGGGTGGAGCATGGCAGTGGGCTTACCCGGAC
CCCCAGCTCTGAAGAGATCAGCCCTACAAAGTTTCCTGGATTGTACCGCACTGGCGAGCCCTCACCTCCCCATGACATCC
TCCATGAGCCTCCTGATATAGTGTCTGATGATGAGAAAGATCATGGGAAGAAAAAAGGGAAATTTAAGAAAAAGGAAAAG
AGGACTGAAGGCTATGCAGCCTTTCAGGAAGATAGCTCTGGAGATGAGGCAGAAAGTCCTTCTAAAATGAAGAGGTCCAA
GGGAATCCATGTTTTCAAGAAGCCCAGCTTTTCTAAAAAGAAGGAAAAGGATTTTAAAATAAAAGAGAAACCCAAAGAAG
AAAAGCATAAAGAAGAAAAGCACAAAGAAGAAAAACATAAAGAGAAGAAGTCGAAAGACTTGACAGCAGCTGATGTTGTT
AAACAGTGGAAGGAAAAGAAGAAAAAGAAAAAGCCAATTCAGGAGCCAGAGGTGCCTCAGATTGATGTTCCAAATCTCAA
ACCCATTTTTGGAATTCCTTTGGCTGATGCAGTAGAGAGGACCATGATGTATGATGGCATTCGGCTGCCAGCCGTTTTCC
GTGAATGTATAGATTACGTAGAGAAGTATGGCATGAAGTGTGAAGGCATCTACAGAGTATCAGGAATTAAATCAAAGGTG
GATGAGCTAAAAGCAGCCTATGACCGGGAGGAGTCTACAAACTTGGAAGACTATGAGCCTAACACTGTAGCCAGTTTGCT
GAAGCAGTATTTGCGAGACCTTCCAGAGAATTTGCTTACCAAAGAGCTTATGCCCAGATTTGAAGAGGCTTGTGGGAGGA
CCACGGAGATTGAGAAAGTGCAGGAATTCCAGCGTTTACTCAAAGAACTGCCAGAATGTAACTATCTTCTGATTTCTTGG
CTCATTGTGCACATGGACCATGTCATTGCAAAGGAACTGGAAACAAAAATGAATATACAGAACATTTCTATAGTGCTCAG
CCCAACTGTGCAGATCAGCAATCGAGTCCTGTATGTGTTTTTCACACATGTGCAAGAACTCTTTGGAAATGTGGTACTAA
AGCAAGTGATGAAACCTCTGCGATGGTCTAACATGGCCACGATGCCCACGCTGCCAGAGACCCAGGCAGGCATCAAGGAG
GAGATCAGGAGACAGGAGTTTCTTTTGAATTGTTTACATCGAGATCTGCAGGGTGGGATAAAGGATTTGTCTAAAGAAGA
AAGATTATGGGAAGTACAAAGAATTTTGACAGCCCTCAAAAGAAAACTGAGAGAAGCTAAAAGACAGGAGTGTGAAACCA
AGATTGCACAAGAGATAGCCAGTCTTTCAAAAGAGGATGTTTCCAAAGAAGAGATGAATGAAAATGAAGAAGTTATAAAT
ATTCTCCTTGCTCAGGAGAATGAGATCCTGACTGAACAGGAGGAGCTCCTGGCCATGGAGCAGTTTCTGCGCCGGCAGAT
TGCCTCAGAAAAAGAAGAGATTGAACGCCTCAGAGCTGAGATTGCTGAAATTCAGAGTCGCCAGCAGCACGGCCGAAGTG
AGACTGAGGAGTACTCCTCTGAGAGCGAGAGCGAGAGTGAGGATGAGGAGGAGCTGCAGATCATTCTGGAAGACTTACAG
AGACAGAACGAAGAGCTGGAAATAAAGAACAATCATTTGAATCAAGCAATTCATGAGGAGCGCGAGGCCATCATCGAGCT
GCGCGTGCAGCTGCGGCTGCTCCAGATGCAGCGAGCCAAGGCTGAGCAGCAGGCGCAGGAGGACGAGGAGCCTGAGTGGC
GCGGGGGTGCCGTCCAGCCGCCCAGAGACGGCGTCCTTGAGCCAAAAGCAGCTAAAGAGCAGCCAAAGGCAGGCAAGGAG
CCGGCAAAGCCATCGCCCAGCAGGGATAGGAAGGAGACGTCCATCTGA
ATGACTGAGTGCTTCCTGCCCCCCACCAGCAGCCCCAGTGAACACCGCAGGGTGGAGCATGGCAGTGGGCTTACCCGGAC
CCCCAGCTCTGAAGAGATCAGCCCTACAAAGTTTCCTGGATTGTACCGCACTGGCGAGCCCTCACCTCCCCATGACATCC
TCCATGAGCCTCCTGATATAGTGTCTGATGATGAGAAAGATCATGGGAAGAAAAAAGGGAAATTTAAGAAAAAGGAAAAG
AGGACTGAAGGCTATGCAGCCTTTCAGGAAGATAGCTCTGGAGATGAGGCAGAAAGTCCTTCTAAAATGAAGAGGTCCAA
GGGAATCCATGTTTTCAAGAAGCCCAGCTTTTCTAAAAAGAAGGAAAAGGATTTTAAAATAAAAGAGAAACCCAAAGAAG
AAAAGCATAAAGAAGAAAAGCACAAAGAAGAAAAACATAAAGAGAAGAAGTCGAAAGACTTGACAGCAGCTGATGTTGTT
AAACAGTGGAAGGAAAAGAAGAAAAAGAAAAAGCCAATTCAGGAGCCAGAGGTGCCTCAGATTGATGTTCCAAATCTCAA
ACCCATTTTTGGAATTCCTTTGGCTGATGCAGTAGAGAGGACCATGATGTATGATGGCATTCGGCTGCCAGCCGTTTTCC
GTGAATGTATAGATTACGTAGAGAAGTATGGCATGAAGTGTGAAGGCATCTACAGAGTATCAGGAATTAAATCAAAGGTG
GATGAGCTAAAAGCAGCCTATGACCGGGAGGAGTCTACAAACTTGGAAGACTATGAGCCTAACACTGTAGCCAGTTTGCT
GAAGCAGTATTTGCGAGACCTTCCAGAGAATTTGCTTACCAAAGAGCTTATGCCCAGATTTGAAGAGGCTTGTGGGAGGA
CCACGGAGATTGAGAAAGTGCAGGAATTCCAGCGTTTACTCAAAGAACTGCCAGAATGTAACTATCTTCTGATTTCTTGG
CTCATTGTGCACATGGACCATGTCATTGCAAAGGAACTGGAAACAAAAATGAATATACAGAACATTTCTATAGTGCTCAG
CCCAACTGTGCAGATCAGCAATCGAGTCCTGTATGTGTTTTTCACACATGTGCAAGAACTCTTTGGAAATGTGGTACTAA
AGCAAGTGATGAAACCTCTGCGATGGTCTAACATGGCCACGATGCCCACGCTGCCAGAGACCCAGGCAGGCATCAAGGAG
GAGATCAGGAGACAGGAGTTTCTTTTGAATTGTTTACATCGAGATCTGCAGGGTGGGATAAAGGATTTGTCTAAAGAAGA
AAGATTATGGGAAGTACAAAGAATTTTGACAGCCCTCAAAAGAAAACTGAGAGAAGCTAAAAGACAGGAGTGTGAAACCA
AGATTGCACAAGAGATAGCCAGTCTTTCAAAAGAGGATGTTTCCAAAGAAGAGATGAATGAAAATGAAGAAGTTATAAAT
ATTCTCCTTGCTCAGGAGAATGAGATCCTGACTGAACAGGAGGAGCTCCTGGCCATGGAGCAGTTTCTGCGCCGGCAGAT
TGCCTCAGAAAAAGAAGAGATTGAACGCCTCAGAGCTGAGATTGCTGAAATTCAGAGTCGCCAGCAGCACGGCCGAAGTG
AGACTGAGGAGTACTCCTCTGAGAGCGAGAGCGAGAGTGAGGATGAGGAGGAGCTGCAGATCATTCTGGAAGACTTACAG
AGACAGAACGAAGAGCTGGAAATAAAGAACAATCATTTGAATCAAGCAATTCATGAGGAGCGCGAGGCCATCATCGAGCT
GCGCGTGCAGCTGCGGCTGCTCCAGATGCAGCGAGCCAAGGCTGAGCAGCAGGCGCAGGAGGACGAGGAGCCTGAGTGGC
GCGGGGGTGCCGTCCAGCCGCCCAGAGACGGCGTCCTTGAGCCAAAAGCAGCTAAAGAGCAGCCAAAGGCAGGCAAGGAG
CCGGCAAAGCCATCGCCCAGCAGGGATAGGAAGGAGACGTCCATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 71 .69 RPM |
| SRP007412_cerebellum | 86 .72 RPM |
| SRP007412_heart | 60 .25 RPM |
| SRP007412_kidney | 73 .12 RPM |
| SRP007412_liver | 42 .36 RPM |
| SRP007412_testis | 47 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000017797 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023120 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019521 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006950 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009010 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1558 | 84.77 | 67.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1848 | 85.36 | 73.89 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009859 retrocopies