Parental gene:

LRRC59, ENSPTRG00000009398

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:48972426..48988791(-)


>ENSPTRG00000009398
ATGACCAAGGCCGGTAGCAAGGGCGGGAACCTCCGCGACAAGCTGGACGGCAACGAACTGGACCTGAGCCTCAGCGACCT
GAATGAGGTCCCGGTGAAGGAGCTGGCTGCCCTTCCAAAGGCCACCATCCTGGATCTGTCTTGTAATAAACTGACTACTC
TACCGTCGGATTTCTGTGGCCTCACACACCTGGTGAAGCTAGACCTGAGTAAGAACAAGCTGCAGCAGCTGCCGGCAGAC
TTTGGCCGTCTGGTCAACCTCCAGCACCTGGATCTCCTCAACAACAAGCTGGTCACCTTGCCTGTCAGCTTTGCTCAGCT
CAAGAACCTGAAGTGGTTGGACCTGAAGGATAACCCCCTGGATCCTGTCCTGGCCAAGGTGGCAGGTGACTGCTTGGATG
AGAAGCAGTGTAAGCAGTGTGCAAACAAGGTGTTACAGCACATGAAGGCCGTGCAGGCAGATCAGGAGCGGGAGAGGCAG
CGGCGGCTGGAAGTAGAACGTGAGGCAGAGAAGAAGCGTGAGGCTAAGCAGCGAGCTAAGGAAGCTCAGGAGCGGGAACT
GCGGAAGCGGGAGAAGGCGGAAGAGAAGGAGCGCCGGAGAAAGGAGTATGATGCCCTCAAAGCAGCCAAGCGGGAGCAGG
AGAAGAAACCTAAGAAGGAAGCAAATCAGGCCCCGAAATCTAAGTCTGGCTCCCGTCCCCGCAAGCCACCACCCCGGAAG
CACACTCGTTCCTGGGCTGTGCTGAAGCTGCTGCTGCTGCTGCTGCTATTTGGTGTGGCGGGAGGGCTGGTTGCTTGTCG
GGTGACAGAGCTGCAGCAGCAGCCCCTCTGCACCAGTGTGAACACCATCTATGACAATGCGGTCCAGGGTCTACGCCGCC
ATGAGATCCTCCAGTGGGTCCTCCAGACCGACTCTCAGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 48 .78 RPM
SRP007412_cerebellum 43 .09 RPM
SRP007412_heart 23 .23 RPM
SRP007412_kidney 49 .30 RPM
SRP007412_liver 163 .61 RPM
SRP007412_testis 67 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018827 ortholog_one2many 1 retrogene
retro_cjac_2342,
Equus caballus ENSECAG00000018072 ortholog_one2one 1 retrogene
retro_ecab_240,
Homo sapiens ENSG00000108829 ortholog_one2one 1 retrogene
retro_hsap_3479,
Gorilla gorilla ENSGGOG00000006310 ortholog_one2one 1 retrogene
retro_ggor_2346,
Monodelphis domestica ENSMODG00000020901 ortholog_one2one 1 retrogene
retro_mdom_1882,
Nomascus leucogenys ENSNLEG00000009066 ortholog_one2one 1 retrogene
retro_nleu_2629,
Pongo abelii ENSPPYG00000008284 ortholog_one2one 3 retrogenes
retro_pabe_2687, retro_pabe_2874, retro_pabe_2875,
Tarsius syrichta ENSTSYG00000000371 ortholog_one2many 1 retrogene
retro_tsyr_25,
Tursiops truncatus ENSTTRG00000000207 ortholog_one2one 1 retrogene
retro_ttru_1931,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2985 70.43 73.62
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Download FASTA sequences of all ENSPTRG00000009398 retrocopies