Parental gene: | PCGF2, ENSPTRG00000009074 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:18647462..18660336(+) |
>ENSPTRG00000009074
ATGCATCGGACTACACGGATCAAAATCACAGAGCTGAACCCCCACCTCATGTGTGCCCTCTGCGGGGGGTACTTCATCGA
CGCCACCACTATCGTGGAGTGCCTGCATTCCTTCTGCAAAACCTGCATCGTGCGCTACCTGGAGACCAACAAATACTGCC
CCATGTGTGACGTGCAGGTCCATAAAACCCGGCCGCTGCTGAGCATCAGGTCTGACAAAACACTTCAAGACATTGTCTAC
AAATTGGTCCCTGGGCTTTTTAAAGATGAGATGAAACGGCGGCGGGATTTCTATGCAGCGTACCCCCTGACGGAGGTCCC
CAACGGCTCCAATGAGGACCGCGGCGAGGTCTTGGAGCAGGAGAAGGGGACTCTGAGTGATGATGAGATTGTCAGCCTCT
CCATCGAATTCTACGAAGGTGCCAGGGACCGGGACGAGAAGAAGGGCCCCCTGGAGAATGGGGATGGGGACAAAGAGAAA
ACAGGGGTGCGCTTCCTGCGATGCCCAGCAGCCATGACTGTCATGCATCTTGCCAAGTTTCTCCGCAACAAGATGGATGT
GCCCAGCAAGTACAAGGTGGAGGTTCTGTACGAGGACGAGCCACTGAAGGAATACTACACCCTCATGGACATCGCCTACA
TCTACCCCTGGCGGCGGAACGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTAGCCACG
GTGCCCACCCCCTCCGAGGGCACCAACACCAGCGGGGCGTCCGAGTGTGAGTCAGTCAGCGACAAGGCTCCCAGCCCTGC
CACCCTGCCAGCCACCTCTTCCTCCCTGCCCAGCCCAGCCACCCCATCCCATGGCTCTCCCAGTTCCCATGGGCCTCCAG
CCACCCACCCTACCTCCCCCACTCCCCCTTCGACAGCCAGTGGGGCCACCACAGCTGCCAACGGGGGTAGCTCGAACTGC
CTGCAGACACCATCCTCCACCAGCAGGGGGCGCAAGATGACTGTCAACGGCGCTCCCGTGCCCCCCTTAACTTGA
ATGCATCGGACTACACGGATCAAAATCACAGAGCTGAACCCCCACCTCATGTGTGCCCTCTGCGGGGGGTACTTCATCGA
CGCCACCACTATCGTGGAGTGCCTGCATTCCTTCTGCAAAACCTGCATCGTGCGCTACCTGGAGACCAACAAATACTGCC
CCATGTGTGACGTGCAGGTCCATAAAACCCGGCCGCTGCTGAGCATCAGGTCTGACAAAACACTTCAAGACATTGTCTAC
AAATTGGTCCCTGGGCTTTTTAAAGATGAGATGAAACGGCGGCGGGATTTCTATGCAGCGTACCCCCTGACGGAGGTCCC
CAACGGCTCCAATGAGGACCGCGGCGAGGTCTTGGAGCAGGAGAAGGGGACTCTGAGTGATGATGAGATTGTCAGCCTCT
CCATCGAATTCTACGAAGGTGCCAGGGACCGGGACGAGAAGAAGGGCCCCCTGGAGAATGGGGATGGGGACAAAGAGAAA
ACAGGGGTGCGCTTCCTGCGATGCCCAGCAGCCATGACTGTCATGCATCTTGCCAAGTTTCTCCGCAACAAGATGGATGT
GCCCAGCAAGTACAAGGTGGAGGTTCTGTACGAGGACGAGCCACTGAAGGAATACTACACCCTCATGGACATCGCCTACA
TCTACCCCTGGCGGCGGAACGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTAGCCACG
GTGCCCACCCCCTCCGAGGGCACCAACACCAGCGGGGCGTCCGAGTGTGAGTCAGTCAGCGACAAGGCTCCCAGCCCTGC
CACCCTGCCAGCCACCTCTTCCTCCCTGCCCAGCCCAGCCACCCCATCCCATGGCTCTCCCAGTTCCCATGGGCCTCCAG
CCACCCACCCTACCTCCCCCACTCCCCCTTCGACAGCCAGTGGGGCCACCACAGCTGCCAACGGGGGTAGCTCGAACTGC
CTGCAGACACCATCCTCCACCAGCAGGGGGCGCAAGATGACTGTCAACGGCGCTCCCGTGCCCCCCTTAACTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 22 .00 RPM |
| SRP007412_cerebellum | 38 .97 RPM |
| SRP007412_heart | 16 .82 RPM |
| SRP007412_kidney | 60 .44 RPM |
| SRP007412_liver | 14 .21 RPM |
| SRP007412_testis | 6 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000011789 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012094 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_11 | 73.22 | 69.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009074 retrocopies