Parental gene: | TMEM98, ENSPTRG00000008993 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:24053272..24066903(-) |
>ENSPTRG00000008993
ATGGAGACTGTGGTGATTGTTGCCATAGGTGTGCTGGCCACCATCTTTCTGGCTTCGTTTGCAGCCTTGGTGCTGGTTTG
CAGGCAGCGCTACTGCCGGCCGCGAGACCTGCTGCAGCGCTATGATTCTAAGCCCATTGTGGACCTCATTGGTGCCATGG
AGACCCAGTCTGAGCCCTCTGAGTTAGAACTGGACGATGTCGTTATCACCAACCCCCACATTGAGGCCATTCTGGAGAAT
GAAGACTGGATCGAAGATGCCTCGGGTCTCATGTCCCACTGCATTGCCATCTTGAAGATTTGTCACACTCTGACAGAGAA
GCTTGTTGCCATGACAATGGGCTCTGGGGCCAAGATGAAGACTTCAGCCAGTGTCAGCGACATCATTGTGGTGGCCAAGC
GGATCAGCCCCAGGGTGGATGATGTTGTGAAGTCGATGTACCCTCCGTTGGACCCCAAACTCCTGGACGCACGGACGACT
GCCCTGCTCCTGTCTGTCAGTCACCTGGTGCTGGTGACAAGGAATGCCTGCCATCTGACGGGAGGCCTGGACTGGATTGA
CCAGTCTCTGTCGGCTGCTGAGGAGCATTTGGAAGTCCTTCGAGAAGCAGCCCTAGCTTCTGAGCCAGATAAAGGCCTCC
CAGGCCCCGAAGGCTTCCTGCAGGAGCAGTCTGCAATTTAG
ATGGAGACTGTGGTGATTGTTGCCATAGGTGTGCTGGCCACCATCTTTCTGGCTTCGTTTGCAGCCTTGGTGCTGGTTTG
CAGGCAGCGCTACTGCCGGCCGCGAGACCTGCTGCAGCGCTATGATTCTAAGCCCATTGTGGACCTCATTGGTGCCATGG
AGACCCAGTCTGAGCCCTCTGAGTTAGAACTGGACGATGTCGTTATCACCAACCCCCACATTGAGGCCATTCTGGAGAAT
GAAGACTGGATCGAAGATGCCTCGGGTCTCATGTCCCACTGCATTGCCATCTTGAAGATTTGTCACACTCTGACAGAGAA
GCTTGTTGCCATGACAATGGGCTCTGGGGCCAAGATGAAGACTTCAGCCAGTGTCAGCGACATCATTGTGGTGGCCAAGC
GGATCAGCCCCAGGGTGGATGATGTTGTGAAGTCGATGTACCCTCCGTTGGACCCCAAACTCCTGGACGCACGGACGACT
GCCCTGCTCCTGTCTGTCAGTCACCTGGTGCTGGTGACAAGGAATGCCTGCCATCTGACGGGAGGCCTGGACTGGATTGA
CCAGTCTCTGTCGGCTGCTGAGGAGCATTTGGAAGTCCTTCGAGAAGCAGCCCTAGCTTCTGAGCCAGATAAAGGCCTCC
CAGGCCCCGAAGGCTTCCTGCAGGAGCAGTCTGCAATTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .15 RPM |
| SRP007412_cerebellum | 20 .43 RPM |
| SRP007412_heart | 5 .04 RPM |
| SRP007412_kidney | 42 .44 RPM |
| SRP007412_liver | 15 .91 RPM |
| SRP007412_testis | 3 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014550 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000006042 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013333 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001191 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022356 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006038 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000008166 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_971 | 92.73 | 73.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2436 | 73.08 | 80.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2990 | 71.98 | 80.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008993 retrocopies