Parental gene: | CCDC55, ENSPTRG00000008957 |
| Aliases: | NSRP1, CCDC55 |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:26857408..26929088(-) |
>ENSPTRG00000008957
ATGGCGATTCCGGGCAGGCAGTATGGGCTTATTTTGCCAAAGAAAACACAGCAGTTGCACCCTGTTTTGCAAAAACCATC
AGTGTTTGGGAATGATTCTGATGATGATGATGAGACCTCTGTGAGTGAAAGCCTTCAGAGGGAAGCTGCTAAGAAGCAGG
CCATGAAACAGACCAAACTGGAAATCCAGAAGGCCCTTGCAGAAGATGCTACTGTGTATGAATATGACAGTATTTATGAT
GAAATGCAGAAAAAAAAGGAGGAAAATAATCCCAAATTGCTTTTGGGGAAAGACAGAAAGCCCAAGTATATTCACAACTT
GCTAAAAGCAGTTGAGATCAGAAAAAAGGAACAGGAAAAAAGAATGGAAAAGAAAATACAGAGAGAACGAGAAATGGAAA
AGGGGGAGTTTGATGATAAAGAAGCATTTGTGACATCTGCATATAAGAAAAAACTGCAAGAGAGAGCTGAAGAAGAAGAA
AGAGAAAAGAGGGCTGCTGCACTGGAAGCATGTTTGGATGTAACCAAGCAGAAAGATCTCAGTGGATTTTATAGGCACCT
ATTAAATCAAGCAGTTGGTGAAGAGGAAGTACCTAAATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAGGAAGAAAAAT
CAAGGGGCTTCTCCAATGAAGTAAGTTCAAAAAACAGAATACCACAAGAGAAATGCATTCTTCAAACTGATGTGAAAGTA
GAGGAAAACCCAGATGCAGACAGTGACTTCGATGCTAAGAGCAGTGCGGATGATGAAATAGAAGAAACTAGAGTGAACTG
CAGAAGGGAAAAGGTCATAGAGACCCCTGAGAATGACTTCAAGCACCACAGGAGTCAAAACTACTCTCGGTCACCTAGTG
AAGAAAGAGGGCACAGTACCAGACACCACACGAAAGGATCACGAACGTCGAGAGGACATGAGAAAAGGGAAGATCAGCAC
CAACAGAAGCAATCCAGAGACCAAGAGAACCATTACACTGACCGTGATTACCGGAAAGAAAGGGATTCTCATAGGCACAG
AGAGGCCAGTCATAGAGATTCCCAATGGAAGAGGCATGAACAGGAAGATAAACCAAGGGCGAGGGACCAAAGAGAAAGAA
GTGACAGAGTATGGAAAAGGGAGAAAGATAGGGAGAAATATTCCCAAAGAGAACAAGAAAGAGATAGACAACAAAATGAT
CAGAACCGACCCAGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGAAAGGAAGGAAGGAAAG
ATATGAAAATAATGATAAATACAGAGATAGAGAAAAACGAGAGGTAGGTGTTCAGTCTTCAGAAAGAAATCGAGACAGAA
AGGAAAGCAGCCCAAATTCTAGGGCAAAGGATAAATTTCTTGACCAAGAAAGATCCAACAAAATGAGAAACATGGCAAAG
GACAAAGAAAGAAACCAAGAGAAACCCTCTAATTCTGAATCATCACTGGGAGCAAAACACAGACTCACAGAGGAAAGGCA
AGAGAAGGGTAAAGAACAAGAGAGACCACCTGAGGCAGTGAGCAAGTTTGCAAAGCGGAACAATGAAGAAACTGTAATGT
CAGCTAGAGACAGGTACTTGGCCAGGCAGATGGCGCGGGTTAATGCAAAGACCTATATTGAGAAAGAAGATGATTGA
ATGGCGATTCCGGGCAGGCAGTATGGGCTTATTTTGCCAAAGAAAACACAGCAGTTGCACCCTGTTTTGCAAAAACCATC
AGTGTTTGGGAATGATTCTGATGATGATGATGAGACCTCTGTGAGTGAAAGCCTTCAGAGGGAAGCTGCTAAGAAGCAGG
CCATGAAACAGACCAAACTGGAAATCCAGAAGGCCCTTGCAGAAGATGCTACTGTGTATGAATATGACAGTATTTATGAT
GAAATGCAGAAAAAAAAGGAGGAAAATAATCCCAAATTGCTTTTGGGGAAAGACAGAAAGCCCAAGTATATTCACAACTT
GCTAAAAGCAGTTGAGATCAGAAAAAAGGAACAGGAAAAAAGAATGGAAAAGAAAATACAGAGAGAACGAGAAATGGAAA
AGGGGGAGTTTGATGATAAAGAAGCATTTGTGACATCTGCATATAAGAAAAAACTGCAAGAGAGAGCTGAAGAAGAAGAA
AGAGAAAAGAGGGCTGCTGCACTGGAAGCATGTTTGGATGTAACCAAGCAGAAAGATCTCAGTGGATTTTATAGGCACCT
ATTAAATCAAGCAGTTGGTGAAGAGGAAGTACCTAAATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAGGAAGAAAAAT
CAAGGGGCTTCTCCAATGAAGTAAGTTCAAAAAACAGAATACCACAAGAGAAATGCATTCTTCAAACTGATGTGAAAGTA
GAGGAAAACCCAGATGCAGACAGTGACTTCGATGCTAAGAGCAGTGCGGATGATGAAATAGAAGAAACTAGAGTGAACTG
CAGAAGGGAAAAGGTCATAGAGACCCCTGAGAATGACTTCAAGCACCACAGGAGTCAAAACTACTCTCGGTCACCTAGTG
AAGAAAGAGGGCACAGTACCAGACACCACACGAAAGGATCACGAACGTCGAGAGGACATGAGAAAAGGGAAGATCAGCAC
CAACAGAAGCAATCCAGAGACCAAGAGAACCATTACACTGACCGTGATTACCGGAAAGAAAGGGATTCTCATAGGCACAG
AGAGGCCAGTCATAGAGATTCCCAATGGAAGAGGCATGAACAGGAAGATAAACCAAGGGCGAGGGACCAAAGAGAAAGAA
GTGACAGAGTATGGAAAAGGGAGAAAGATAGGGAGAAATATTCCCAAAGAGAACAAGAAAGAGATAGACAACAAAATGAT
CAGAACCGACCCAGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGAAAGGAAGGAAGGAAAG
ATATGAAAATAATGATAAATACAGAGATAGAGAAAAACGAGAGGTAGGTGTTCAGTCTTCAGAAAGAAATCGAGACAGAA
AGGAAAGCAGCCCAAATTCTAGGGCAAAGGATAAATTTCTTGACCAAGAAAGATCCAACAAAATGAGAAACATGGCAAAG
GACAAAGAAAGAAACCAAGAGAAACCCTCTAATTCTGAATCATCACTGGGAGCAAAACACAGACTCACAGAGGAAAGGCA
AGAGAAGGGTAAAGAACAAGAGAGACCACCTGAGGCAGTGAGCAAGTTTGCAAAGCGGAACAATGAAGAAACTGTAATGT
CAGCTAGAGACAGGTACTTGGCCAGGCAGATGGCGCGGGTTAATGCAAAGACCTATATTGAGAAAGAAGATGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .45 RPM |
| SRP007412_cerebellum | 35 .71 RPM |
| SRP007412_heart | 37 .10 RPM |
| SRP007412_kidney | 29 .71 RPM |
| SRP007412_liver | 23 .18 RPM |
| SRP007412_testis | 89 .05 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000009868 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008130 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000003513 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_162 | 83.17 | 72.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008957 retrocopies