Parental gene: | EIF5A, ENSPTRG00000008674 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:3300] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:7366419..7372573(+) |
>ENSPTRG00000008674
ATGTGTGGAACTGGGGGGACTGATTCCAAGACAAGGCGCCCACCCCACAGAGCAAGTTTTCTGAAACGTTTGGAATCGAA
GCCTCTTAAAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAG
CATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAG
CACGGCCACGCCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCA
TAATATGGATGTCCCCAACATCAAAAGGAATGACTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCACTGCTCCAGG
ACAGCGGGGAGGTACGAGAGGACCTTCGTCTTCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGA
GAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAA
ATGTGTGGAACTGGGGGGACTGATTCCAAGACAAGGCGCCCACCCCACAGAGCAAGTTTTCTGAAACGTTTGGAATCGAA
GCCTCTTAAAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAG
CATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAG
CACGGCCACGCCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCA
TAATATGGATGTCCCCAACATCAAAAGGAATGACTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCACTGCTCCAGG
ACAGCGGGGAGGTACGAGAGGACCTTCGTCTTCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGA
GAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 113 .09 RPM |
| SRP007412_cerebellum | 78 .72 RPM |
| SRP007412_heart | 76 .57 RPM |
| SRP007412_kidney | 130 .79 RPM |
| SRP007412_liver | 257 .98 RPM |
| SRP007412_testis | 105 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000132507 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012032 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000006652 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014230 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015621 | within_species_paralog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000017939 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009783 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_442 | 97.56 | 89.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_504 | 95.12 | 89.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1198 | 87.80 | 66.85 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008674 retrocopies