Parental gene:

SNRPA1, ENSPTRG00000007513

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:15:98824668..98838833(-)


>ENSPTRG00000007513
ATGGTCAAGCTGACGGCGGAGCTGATCGAGCAGGCGGCGCAGTACACCAACGCGGTGCGCGACCGGGAGCTGGACCTCCG
GGGGTATAAAATTCCCGTCATTGAAAATCTAGGTGCTACGTTAGACCAGTTTGATGCTATTGATTTTTCTGACAATGAGA
TCAGGAAACTGGATGGTTTTCCTTTGTTGAGAAGACTGAAAACATTGTTAGTGAACAACAACAGAATATGCCGTATAGGT
GAGGGACTTGATCAGGCTCTGCCCTGTCTGACAGAACTCATTCTCACCAATAATAGTCTCGTGGAACTGGGTGATCTGGA
CCCTCTGGCATCTCTTAAATCGCTGACTTACCTAAGTATCCTAAGAAATCCGGTAACCAATAAGAAGCATTACAGATTGT
ATGTGATTTATAAAGTTCCGCAAGTCAGAGTACTGGATTTCCAGAAAGTGAAACTAAAAGAGCGTCAGGAAGCAGAGAAA
ATGTTCAAGGGCAAACGGGGTGCACAGCTTGCAAAGGATATTGCCAGGAGAAGCAAAACTTTTAATCCAGGTGCTGGTTT
GCCAACTGACAAAAAGAAAGGTGGGCCATCTCCAGGGGATGTAGAAGCAATCAAGAATGCCATAGCAAATGCTTCAACTC
TGGCTGAAGTGGAGAGGCTGAAGGGGTTGCTGCAGTCTGGTCAGATCCCTGGCAGAGAACGCAGATCGGGGCCCACTGAT
GATGGTGAAGAAGAGATGGAAGAAGACACAGTCACAAACGGGTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .73 RPM
SRP007412_cerebellum 27 .78 RPM
SRP007412_heart 12 .71 RPM
SRP007412_kidney 19 .06 RPM
SRP007412_liver 18 .13 RPM
SRP007412_testis 34 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007128 ortholog_one2one 1 retrogene
retro_amel_850,
Bos taurus ENSBTAG00000013593 ortholog_one2one 1 retrogene
retro_btau_1453,
Canis familiaris ENSCAFG00000010564 ortholog_one2one 1 retrogene
retro_cfam_1208,
Echinops telfairi ENSETEG00000010019 ortholog_one2one 1 retrogene
retro_etel_1366,
Felis catus ENSFCAG00000018594 ortholog_one2one 1 retrogene
retro_fcat_322,
Homo sapiens ENSG00000131876 ortholog_one2one 2 retrogenes
retro_hsap_2148, retro_hsap_2601,
Loxodonta africana ENSLAFG00000012638 ortholog_one2one 1 retrogene
retro_lafr_1230,
Myotis lucifugus ENSMLUG00000014213 ortholog_one2one 1 retrogene
retro_mluc_2442,
Mustela putorius furo ENSMPUG00000010938 ortholog_one2one 1 retrogene
retro_mputfur_1139,
Oryctolagus cuniculus ENSOCUG00000017417 ortholog_one2one 3 retrogenes
retro_ocun_1248, retro_ocun_1775, retro_ocun_366,
Tupaia belangeri ENSTBEG00000001669 ortholog_one2one 2 retrogenes
retro_tbel_1772, retro_tbel_3447,
Tarsius syrichta ENSTSYG00000003965 ortholog_one2one 2 retrogenes
retro_tsyr_1229, retro_tsyr_1943,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1525 96.89 100.00
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Download FASTA sequences of all ENSPTRG00000007513 retrocopies