Parental gene:

TOX4, ENSPTRG00000006126

Aliases:TOX4, C14orf92
Description:TOX high mobility group box family member 4 [Source:HGNC Symbol;Acc:20161]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:20371287..20393659(+)


>ENSPTRG00000006126
ATGGAGTTTCCCGGAGGAAATGACAATTACCTGACGATCACAGGGCCTTCGCACCCCTTCCTGTCAGGGGCCGAGACATT
CCATACACCAAGCTTGGGTGATGAGGAATTTGAAATCCCACCTATCTCCTTGGATTCTGATCCCTCATTGGCTGTCTCAG
ATGTGGTTGGACATTTTGATGACCTGGCAGACCCTTCCTCTTCACAGGATGGCAGTTTTTCAGCCCAGTATGGGGTCCAG
ACATTGGACATGCCTGTGGGCATGACCCATGGCTTGATGGAGCAGGGCGGGGGGCTCCTGAGTGGGGGCTTGACCATGGA
CTTGGACCACTCTATAGGAACTCAGTATAGTGCCAACCCACCTGTTACAATTGATGTACCAATGACAGACATGACATCTG
GCTTGATGGGGCATAGCCAGTTGACCACCATTGATCAGTCAGAACTGAGTTCCCAACTGGGTTTGAGCCTAGGGGGTGGC
ACCATCCTGCCACCTGCCCAGTCACCTGAAGATCGTCTTTCAACCACCCCTTCACCTACTAGTTCACTTCACGAGGATGG
TGTTGAGGATTTCCGGAGGCAACTTTCCAGCCAGAAGACAGTCGTGGTGGAAGCAGGGAAAAAGCAGAAGGCCCCAAAGA
AGAGAAAAAAGAAAGATCCTAATGAACCTCAGAAACCAGTTTCAGCATATGCTTTATTCTTTCGTGACACACAGGCTGCC
ATCAAGGGACAGAATCCTAATGCCACTTTTGGTGAGGTTTCAAAAATTGTGGCCTCCATGTGGGATAGTCTTGGAGAGGA
GCAAAAACAGGTATATAAGAGGAAAACTGAGGCTGCCAAGAAAGAGTATCTGAAGGCACTGGCTGCTTACAAAGACAACC
AGGAGTGTCAGGCCACTGTGGAAACAGTGGAATTGGATCCAGCACCATCATCACAAACTCCTTCTCCACCTCCTATGGCT
ACTGTTGACCCAGCATCTCCAGCACCAGCTTCAATAGAGCCCCCTGCCCTGTCTCCATCCATTGTTGTTAACTCCACCCT
TTCATCCTATGTGGCAAACCAGGCATCTTCTGGAGCTGGGGGTCAGCCCAATATCACCAAGTTGATTATTACCAAACAAA
TGTTGCCCTCTTCCATTACTATGTCTCAAGGAGGGATGGTTACTGTTATCCCAGCCACAGTGGTGACCTCCCGGGGGCTC
CAACTAGGCCAAACCAGTACAGCTACTATCCAGCCCAGTCAACAAGCCCAGATTGTCACTCGGTCAGTGTTGCAGGCAGC
AGCAGCTGCTGCTGCTGCTGCTTCTATGCAACTGCCTCCACCCCGACTACAGCCCCCTCCATTACAACAGATGCCACAGC
CCCCGACTCAGCAGCAAGTTACCATTCTGCAGCAGCCTCCTCCACTCCAGGCCATGCAACAGCCTCCACCTCAGAAAGTT
CGAATCAATTTACAGCAACAGCCTCCTCCTCTGCAGATCAAGAGTGTGCCTCTACCCACTTTGAAAATGCAGACTACCTT
AGTCCCACCAACTGTGGAAAGTAGTCCTGAGCGGCCTATGAACAACAGCCCTGAGGCCCATACAGTGGAGGCAACTTCTC
CTGAGACTATCTGTGAGATGATCACAGATGTAGTTCCTGAGGTTGAGTCTCCTTCTCAGATGGATGTTGAATTGGTGAGT
GGGTCTCCTGTGGCACTCTCACCCCAGCCTCGATGTGTGAGGTCTGGTTGTGAGAACCCTCCCATTGTGAGTAAGGACTG
GGACAATGAATACTGCAGCAATGAGTGTGTGGTGAAGCACTGCAGGGATGTATTCTTGGCCTGGGTAGCCTCTAGAAATT
CAAACACAGTGGTGTTTGTGAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 52 .64 RPM
SRP007412_cerebellum 72 .74 RPM
SRP007412_heart 51 .24 RPM
SRP007412_kidney 49 .71 RPM
SRP007412_liver 32 .05 RPM
SRP007412_testis 94 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006261 ortholog_one2one 1 retrogene
retro_amel_858,
Canis familiaris ENSCAFG00000005647 ortholog_one2one 2 retrogenes
retro_cfam_1625, retro_cfam_1698,
Choloepus hoffmanni ENSCHOG00000000714 ortholog_one2one 2 retrogenes
retro_chof_2239, retro_chof_631,
Homo sapiens ENSG00000092203 ortholog_one2one 1 retrogene
retro_hsap_2970,
Macropus eugenii ENSMEUG00000010501 ortholog_one2one 1 retrogene
retro_meug_1384,
Mustela putorius furo ENSMPUG00000000181 ortholog_one2one 1 retrogene
retro_mputfur_718,
Mus musculus ENSMUSG00000016831 ortholog_one2many 1 retrogene
retro_mmus_11,
Nomascus leucogenys ENSNLEG00000014556 ortholog_one2one 1 retrogene
retro_nleu_2027,
Pongo abelii ENSPPYG00000005598 ortholog_one2one 1 retrogene
retro_pabe_2463,
Sus scrofa ENSSSCG00000029203 ortholog_one2one 1 retrogene
retro_sscr_361,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2008 91.97 100.00
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Download FASTA sequences of all ENSPTRG00000006126 retrocopies