Parental gene:

MED21, ENSPTRG00000004785

Aliases:MED21, SURB7
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:61477482..61485219(-)


>ENSPTRG00000004785
ATGGCGGATCGGCTCACGCAGCTTCAGGACGCTGTGAATTCGCTTGCAGATCAGTTTTGTAATGCCATTGGAGTATTGCA
GCAATGTGGTCCTCCTGCCTCTTTCAATAATATTCAGACAGCAATTAACAAAGACCAGCCAGCTAACCCTACAGAAGAGT
ATGCCCAGCTTTTTGCAGCACTGATTGCACGAACAGCAAAAGACATTGATGTTTTGATAGATTCCTTACCCAGTGAAGAA
TCTACAGCTGCTTTACAGGCTGCTAGCTTGTATAAGCTAGAAGAAGAAAACCATGAAGCTGCTACATGTCTGGAGGATGT
TGTTTATCGAGGAGACATGCTTCTGGAAAAGATACAAAGCGCACTTGCTGATATTGCACAGTCACAGCTGAAGACAAGAA
GTGGTGAAGTCTCTGTCACCCAAGCTGAAGTGCAGTTCTGTGATCATGGCTCACTGCAGCTTCAACCTGGGTTCAGGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 21 .25 RPM
SRP007412_cerebellum 15 .27 RPM
SRP007412_heart 14 .78 RPM
SRP007412_kidney 24 .16 RPM
SRP007412_liver 5 .76 RPM
SRP007412_testis 101 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011670 possible_ortholog 1 retrogene
retro_amel_108,
Dasypus novemcinctus ENSDNOG00000010041 ortholog_one2one 1 retrogene
retro_dnov_998,
Homo sapiens ENSG00000152944 ortholog_one2one 1 retrogene
retro_hsap_4105,
Gorilla gorilla ENSGGOG00000016313 ortholog_one2one 1 retrogene
retro_ggor_2756,
Myotis lucifugus ENSMLUG00000007678 possible_ortholog 1 retrogene
retro_mluc_229,
Macaca mulatta ENSMMUG00000003218 ortholog_one2one 1 retrogene
retro_mmul_2365,
Pongo abelii ENSPPYG00000004377 ortholog_one2one 1 retrogene
retro_pabe_3361,
Pteropus vampyrus ENSPVAG00000013357 ortholog_one2one 1 retrogene
retro_pvam_449,
Ictidomys tridecemlineatus ENSSTOG00000008391 ortholog_one2one 2 retrogenes
retro_itri_1005, retro_itri_1057,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2786 83.87 58.49
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Download FASTA sequences of all ENSPTRG00000004785 retrocopies