Parental gene: | RAB3IL1, ENSPTRG00000003755 |
| Aliases: | None |
| Description: | RAB3A interacting protein (rabin3)-like 1 [Source:HGNC Symbol;Acc:9780] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 11:59807456..59830986(-) |
>ENSPTRG00000003755
ATGAGTGCAGGGACTGTCCGCTACGCCCCATCAGGCCTGTGCCCTGTACTTGAGGGGAACTTGAGAGAAGAGCCCTGGGG
CACAGACAGCCCACCCCAGCCAGACCAGGGCCTCCCGCCACCCCTTGCAGCTGTCCCGGTCCCCTGGAAGAGCACGGACC
CCTGCCAAGGCCACAGGGAGTCCCCAGGAGCCCTGGTGGAGACCTCTGCAGGGGAGGAGGCCCAAGGCCAGGAGGGCCCC
GCAGCCGCCCAGCTGGACGTGTTGCGCCTGCGCAGCTCTTCCATGGAGATCCGAGAGAAGGGCTCCGAGTTCCTGAAGGA
GGAGCTGCACAGAGCGCAGAAGGAGCTGAAGCTAAAGGACGAGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCTAG
AACAGGAGCTGGAAGAGCTGACGGCCAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGAGAAGCCAACATGAAGCAGGCA
GCATCAGAAAAGCAGCTGAAGGAGGCTCGGGGCAAGATCGACATGCTGCAGGCAGAGGTGACAGCCTTGAAGACGCTGGT
CATCACGTCCACACCAGCCTCTCCCAACCGCGAGCTTCACCCCCAGCTGCTGAGCCCCACCAAGGCCGGGCCCCGAAAGG
GCCACTCTCGCCACAAGAGCACCAGCAGCACCCTCTGCCCCGCCGTGTGTCCCGCTGCGGGACACACCCTCACCCCAGAC
AGAGAGGGCAAGGAGGTGGACACAATCCTGTTTGCAGAGTTCCAGGCCTGGAGGGAATCCCCCACCCTGGACAAGACCTG
CCCCTTCCTGGAAAGGGTGTACCGGGAGGACGTGGGCCCCTGCCTGGACTTCACGATGCAGGAGCTCTCGGTGCTGGTAC
GGGCCGCCGTGGAGGACAACACGCTCACCATTGAGCCGGTGGCTTCGCAGACGCTGCCCACAGTGAAGGTGGCCGAGGTT
GACTGTAGCAGCACCAACACATGTGCCCTGAGCGGGCTGACCCGCACCTGCCGCCACCGAATCCGGCTCGGGGACTCCAA
AAGCCACTACTACATCTCGCCATCTTCCCGGGCCAGGATCACCGCAGTGTGCAACTTCTTCACCTACATCCGCTACATCC
AGCAAGGCCTGGTGCGGCAGGACGCAGAGCCCATGTTCTGGGAGATCATGAGGCTGCGGAAGGAGATGTCACTGGCCAAG
CTCGGCTTCTTCCCCCAGGAGGCTTAG
ATGAGTGCAGGGACTGTCCGCTACGCCCCATCAGGCCTGTGCCCTGTACTTGAGGGGAACTTGAGAGAAGAGCCCTGGGG
CACAGACAGCCCACCCCAGCCAGACCAGGGCCTCCCGCCACCCCTTGCAGCTGTCCCGGTCCCCTGGAAGAGCACGGACC
CCTGCCAAGGCCACAGGGAGTCCCCAGGAGCCCTGGTGGAGACCTCTGCAGGGGAGGAGGCCCAAGGCCAGGAGGGCCCC
GCAGCCGCCCAGCTGGACGTGTTGCGCCTGCGCAGCTCTTCCATGGAGATCCGAGAGAAGGGCTCCGAGTTCCTGAAGGA
GGAGCTGCACAGAGCGCAGAAGGAGCTGAAGCTAAAGGACGAGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCTAG
AACAGGAGCTGGAAGAGCTGACGGCCAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGAGAAGCCAACATGAAGCAGGCA
GCATCAGAAAAGCAGCTGAAGGAGGCTCGGGGCAAGATCGACATGCTGCAGGCAGAGGTGACAGCCTTGAAGACGCTGGT
CATCACGTCCACACCAGCCTCTCCCAACCGCGAGCTTCACCCCCAGCTGCTGAGCCCCACCAAGGCCGGGCCCCGAAAGG
GCCACTCTCGCCACAAGAGCACCAGCAGCACCCTCTGCCCCGCCGTGTGTCCCGCTGCGGGACACACCCTCACCCCAGAC
AGAGAGGGCAAGGAGGTGGACACAATCCTGTTTGCAGAGTTCCAGGCCTGGAGGGAATCCCCCACCCTGGACAAGACCTG
CCCCTTCCTGGAAAGGGTGTACCGGGAGGACGTGGGCCCCTGCCTGGACTTCACGATGCAGGAGCTCTCGGTGCTGGTAC
GGGCCGCCGTGGAGGACAACACGCTCACCATTGAGCCGGTGGCTTCGCAGACGCTGCCCACAGTGAAGGTGGCCGAGGTT
GACTGTAGCAGCACCAACACATGTGCCCTGAGCGGGCTGACCCGCACCTGCCGCCACCGAATCCGGCTCGGGGACTCCAA
AAGCCACTACTACATCTCGCCATCTTCCCGGGCCAGGATCACCGCAGTGTGCAACTTCTTCACCTACATCCGCTACATCC
AGCAAGGCCTGGTGCGGCAGGACGCAGAGCCCATGTTCTGGGAGATCATGAGGCTGCGGAAGGAGATGTCACTGGCCAAG
CTCGGCTTCTTCCCCCAGGAGGCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .35 RPM |
| SRP007412_cerebellum | 3 .15 RPM |
| SRP007412_heart | 6 .03 RPM |
| SRP007412_kidney | 26 .65 RPM |
| SRP007412_liver | 16 .24 RPM |
| SRP007412_testis | 23 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000007376 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000167994 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012399 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015148 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003273 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003175 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2518 | 62.94 | 75.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000003755 retrocopies