Parental gene: | PPP1R8, ENSPTRG00000000417 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:27839378..27860346(+) |
>ENSPTRG00000000417
ATGGCGGCAGCCGCGAACTCCGGCTCCAGCCTCCCGCTGTTCGACTGCCCAACCTGGGCAGGCAAGCCCCCTCCCGGTTT
ACATCTGGATGTAGTCAAAGGAGACAAACTAATTGAGAAACTGATTATTGATGAGAAGAAGTATTACTTATTTGGGAGAA
ACCCCGATTTGTGTGACTTTACCATTGACCACCAGTCTTGCTCTCGGGTCCATGCTGCACTTGTCTACCACAAGCATCTG
AAGAGAGTTTTCCTGATAGATCTCAACAGTACACACGGCACTTTCTTGGGTCACATTCGGTTGGAACCTCACAAGCCTCA
GCAAATTCCCATCGATTCCACGGTCTCATTTGGCGCATCCACAAGGGCATACACTCTGCGCGAGAAGCCTCAGACATTGC
CATCGGCTGTGAAAGGAGATGAGAAGATGGGTGGAGAGGATGATGAACTCAAGGGCTTACTGGGGCTTCCAGAGGAGGAA
ACTGAGCTTGATAACCTAACAGAGTTCAACACTGCCCACAACAAGCGGATTTCTACCCTTACCATTGAGGAGGGAAATCT
GGACATTCAAAGACCAAAGAGGAAGAGGAAGAACTCACGGGTGACATTCAGTGAGGATGATGAGATCATCAACCCAGAGG
ATGTGGATCCCTCAGTTGGTCGATTCAGGAACATGGTGCAAACTGCAGTGGTCCCAGTCAAGAAGAAGCGTGTGGAGGGC
CCTGGCTCCCTGGGCCTGGAGGAATCAGGGAGCAGGCGCATGCAGAACTTTGCCTTCAGCGGAGGACTCTACGGGGGCCT
GCCCCCCACACACAGTGAAGCAGGCTCCCAGCCGCATGGCATCCATGGGACAGCACTCATCGGTGGCTTGCCCATGCCAT
ACCCAAACCTTGCCCCTGATGTGGACTTGACTCCTGTTGTGCCGTCAGCAGTGAACATGAACCCTGCACCAAACCCTGCA
GTCTATAACCCTGAAGCTGTAAATGAACCCAAGAAGAAGAAATATGCAAAAGAGGCTTGGCCAGGCAAGAAGCCCACACC
TTCCTTGCTGATTTGA
ATGGCGGCAGCCGCGAACTCCGGCTCCAGCCTCCCGCTGTTCGACTGCCCAACCTGGGCAGGCAAGCCCCCTCCCGGTTT
ACATCTGGATGTAGTCAAAGGAGACAAACTAATTGAGAAACTGATTATTGATGAGAAGAAGTATTACTTATTTGGGAGAA
ACCCCGATTTGTGTGACTTTACCATTGACCACCAGTCTTGCTCTCGGGTCCATGCTGCACTTGTCTACCACAAGCATCTG
AAGAGAGTTTTCCTGATAGATCTCAACAGTACACACGGCACTTTCTTGGGTCACATTCGGTTGGAACCTCACAAGCCTCA
GCAAATTCCCATCGATTCCACGGTCTCATTTGGCGCATCCACAAGGGCATACACTCTGCGCGAGAAGCCTCAGACATTGC
CATCGGCTGTGAAAGGAGATGAGAAGATGGGTGGAGAGGATGATGAACTCAAGGGCTTACTGGGGCTTCCAGAGGAGGAA
ACTGAGCTTGATAACCTAACAGAGTTCAACACTGCCCACAACAAGCGGATTTCTACCCTTACCATTGAGGAGGGAAATCT
GGACATTCAAAGACCAAAGAGGAAGAGGAAGAACTCACGGGTGACATTCAGTGAGGATGATGAGATCATCAACCCAGAGG
ATGTGGATCCCTCAGTTGGTCGATTCAGGAACATGGTGCAAACTGCAGTGGTCCCAGTCAAGAAGAAGCGTGTGGAGGGC
CCTGGCTCCCTGGGCCTGGAGGAATCAGGGAGCAGGCGCATGCAGAACTTTGCCTTCAGCGGAGGACTCTACGGGGGCCT
GCCCCCCACACACAGTGAAGCAGGCTCCCAGCCGCATGGCATCCATGGGACAGCACTCATCGGTGGCTTGCCCATGCCAT
ACCCAAACCTTGCCCCTGATGTGGACTTGACTCCTGTTGTGCCGTCAGCAGTGAACATGAACCCTGCACCAAACCCTGCA
GTCTATAACCCTGAAGCTGTAAATGAACCCAAGAAGAAGAAATATGCAAAAGAGGCTTGGCCAGGCAAGAAGCCCACACC
TTCCTTGCTGATTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 19 .45 RPM |
| SRP007412_cerebellum | 31 .58 RPM |
| SRP007412_heart | 13 .17 RPM |
| SRP007412_kidney | 22 .78 RPM |
| SRP007412_liver | 18 .53 RPM |
| SRP007412_testis | 55 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012023 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000117751 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012062 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000017834 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006933 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004381 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_296 | 81.72 | 78.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000417 retrocopies