Parental gene: | SHISA5, ENSPPYG00000013902 |
| Aliases: | None |
| Description: | protein shisa-5 [Source:RefSeq peptide;Acc:NP_001124981] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:98041345..98077283(+) |
>ENSPPYG00000013902
ATGGCTTCCCGTGGACTCAGCCTCTTCCCCGAGTCCTGTCCAGATTTCTGCTGTGGTACCTGTCATGACCAATACTGCTG
CTCTGATGTGCTGAAGAAATTTGTGTGGACCGAGAAAAGGTGTGCTGTGCCTGAGGCCAGTGTGCCTGCCAGTGTAGAGC
CGGTGGAGCAGCTGGGCTCGGCACTGAGGTTTCGCCCTGGCTACAACGACCCCATGTCAGGGTTCGGAGCGACCTTGGCC
GTTGGCCTGACCATCTTTGTGCTGTCTGTTGTCACCATCATCATCTGCTTCACCTGCTCCTGCTGCTGCCTGTACAAGAC
GTGCCGCCGACCACGTCCGGTTGTCACCACCACCACATCCACCACTGTGGTGCATGCCCCTTATCCTCAGCCTCCAAGTG
TGCCGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACACCATGCCGCCTCAGCCAGGGATGCCAGCAGCACCCTAC
CCAATGCAGTACCCACCACCTTACCCAGCCCAGCCCATGGGCCCACCGGCCTACCACGAGACCCTGGCTGGAGGAGCAGC
TGCACCCTACCCCGCCAGCCAGCCTCCTTACAACCCGGCCTACATGGATGCCCCGAAGGCGGCCCTCTGA
ATGGCTTCCCGTGGACTCAGCCTCTTCCCCGAGTCCTGTCCAGATTTCTGCTGTGGTACCTGTCATGACCAATACTGCTG
CTCTGATGTGCTGAAGAAATTTGTGTGGACCGAGAAAAGGTGTGCTGTGCCTGAGGCCAGTGTGCCTGCCAGTGTAGAGC
CGGTGGAGCAGCTGGGCTCGGCACTGAGGTTTCGCCCTGGCTACAACGACCCCATGTCAGGGTTCGGAGCGACCTTGGCC
GTTGGCCTGACCATCTTTGTGCTGTCTGTTGTCACCATCATCATCTGCTTCACCTGCTCCTGCTGCTGCCTGTACAAGAC
GTGCCGCCGACCACGTCCGGTTGTCACCACCACCACATCCACCACTGTGGTGCATGCCCCTTATCCTCAGCCTCCAAGTG
TGCCGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACACCATGCCGCCTCAGCCAGGGATGCCAGCAGCACCCTAC
CCAATGCAGTACCCACCACCTTACCCAGCCCAGCCCATGGGCCCACCGGCCTACCACGAGACCCTGGCTGGAGGAGCAGC
TGCACCCTACCCCGCCAGCCAGCCTCCTTACAACCCGGCCTACATGGATGCCCCGAAGGCGGCCCTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 111 .47 RPM |
| SRP007412_cerebellum | 38 .91 RPM |
| SRP007412_heart | 23 .54 RPM |
| SRP007412_kidney | 88 .80 RPM |
| SRP007412_liver | 70 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002915 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000164054 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028207 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000010062 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006485 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014888 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2120 | 94.16 | 65.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3653 | 83.09 | 64.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3739 | 83.58 | 64.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000013902 retrocopies