Parental gene: | SLMO2, ENSPPYG00000011182 |
| Aliases: | None |
| Description: | slowmo homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:15892] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 20:57133040..57143050(-) |
>ENSPPYG00000011182
ATGCAGAAATACCCAAACCCTATGAACCCAAGTGTGGTTGGAGTTGATGTGTTGGACAGACATATAGATCCCTCTGGAAA
GTTGCACAGCCACAGACTTCTCAGCACAGAGTGGGGACTGCCTTCCATTGTGAAGTCTCTTATTGGTGCAGCAAGAACGA
AAACATATGTGCAAGAACATTCTGTAGTTGATCCTGTAGAGAAAACAATGGAACTTAAATCTACTAATATTTCATTTACA
AACATGGTTTCGGTAGATGAGAGACTTATATACAAACCACATCCTCAGGATCCAGAAAAAACTGTTTTGACACAAGAAGC
CATAATCACCGTGAAAGGAGTTAGCCTCAGCAGTTACCTTGAAGGACTGATGGCAAGTACGATATCCTCAAACGCTAGTA
AAGGCCGAGAAGCAATGGAATGGGTAATACATAAATTAAATGCTGAGATTGAAGAACTGACAGCCTCAGCAAGAGGAACC
ATAAGGACTCCAATGGCAGCAGCAGCGTTTGCAGAGAAGTGA
ATGCAGAAATACCCAAACCCTATGAACCCAAGTGTGGTTGGAGTTGATGTGTTGGACAGACATATAGATCCCTCTGGAAA
GTTGCACAGCCACAGACTTCTCAGCACAGAGTGGGGACTGCCTTCCATTGTGAAGTCTCTTATTGGTGCAGCAAGAACGA
AAACATATGTGCAAGAACATTCTGTAGTTGATCCTGTAGAGAAAACAATGGAACTTAAATCTACTAATATTTCATTTACA
AACATGGTTTCGGTAGATGAGAGACTTATATACAAACCACATCCTCAGGATCCAGAAAAAACTGTTTTGACACAAGAAGC
CATAATCACCGTGAAAGGAGTTAGCCTCAGCAGTTACCTTGAAGGACTGATGGCAAGTACGATATCCTCAAACGCTAGTA
AAGGCCGAGAAGCAATGGAATGGGTAATACATAAATTAAATGCTGAGATTGAAGAACTGACAGCCTCAGCAAGAGGAACC
ATAAGGACTCCAATGGCAGCAGCAGCGTTTGCAGAGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 3 .48 RPM |
| SRP007412_cerebellum | 9 .24 RPM |
| SRP007412_heart | 5 .51 RPM |
| SRP007412_kidney | 5 .37 RPM |
| SRP007412_liver | 5 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000004402 | ortholog_one2one | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000012220 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018905 | ortholog_one2one | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000012397 | ortholog_one2one | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000014548 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000000513 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000003697 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000031431 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000101166 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004803 | ortholog_one2one | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000014902 | ortholog_one2one | 12 retrogenes | |
| Myotis lucifugus | ENSMLUG00000014907 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000007560 | ortholog_one2many | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000016608 | ortholog_one2one | 5 retrogenes | |
| Mustela putorius furo | ENSMPUG00000007075 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009579 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005621 | possible_ortholog | 8 retrogenes | |
| Otolemur garnettii | ENSOGAG00000013382 | ortholog_one2one | 10 retrogenes | |
| Pan troglodytes | ENSPTRG00000013682 | ortholog_one2one | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000005226 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007525 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000000493 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012533 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000008417 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000001044 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_371 | 79.47 | 86.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1462 | 83.67 | 55.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2631 | 70.08 | 72.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2632 | 63.57 | 73.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2731 | 62.02 | 73.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_3089 | 88.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_3411 | 79.00 | 57.80 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000011182 retrocopies