Parental gene:

COIL, ENSPPYG00000008248

Aliases:None
Description:coilin [Source:HGNC Symbol;Acc:2184]
Organism:Orangutan (Pongo abelii)
Coordinates:17:35251237..35264135(+)


>ENSPPYG00000008248
ATGTGTTTACAAATTGCTCACTCTAGCTTTCTCTCTTGTTCTTTTGACAGAGTTAAATTAGAAGGGAGAGGAGTTGCTGA
GAATTCTGTAGTCATCAGTAATGGTGACACTAATTTATCTCTTAGAAAAGCAAAGAAGCGGGCATTTCAGTTAGAGGAGG
ATGAAGAAACTGAACCAGATTGCAGATATTCAAAGAAGCATTGGAAGAGTCAAGAGAACAATAACAATAATGAGAAGGTC
TTGGATCTGGAACCAAAAGCTGTCACAGATCAGACTGTCAGCAAAAAAAACAAGAGAAAAAATAAAGCAACCTGTGGCAC
AGTGGGTGATGATAACAAAGAGGCCGAAAGAAAATCACCAAAGAAAAAGGAGAAATGTGAATATAAAAAAAAGGCCAAGA
ATCCCAAGTCTCCTAAAGTACAGGCAGTGAAAGACTGGGCCAATCAGAGATGTAGTTCTCCAAAAGGTTCTGCTAGAAAC
AGCCTTGTTAAAGCCAAAAGGAAAGGTAGTGTAAGCGTTTGCTCGAAAGAGAGTCCCAGTTCCTCCTCGGAGTCTGAGTC
TTGTGACGAATCTATCAGTGATGGTCCCAGCAAAGTCACTTTGGAGGCCAGAAATTCCTCAGAGAAATTACCAACTGAGT
TATCAAAGGAAGAACCCTCTACCAAAAATACAACTGCAGACCAGCTGGCTATAAAACTTGGCTTTAGCCTTACCCCCAGC
AAGGGCAAGACCTCTGGAACAACATCTTCCAGTTCAGACTCCAGTTCAGAGTCAGACGACCAATGCTTGATGTCATCGAG
CACCCCGGAGTGTGCTGCGGGTTTCTTAAAGACAGTAGGCCTTTTTGCAGGAAGAGGTCGTCCAGGCCCAGGACTGTCAT
CACAGACTGCAGGTGCTGCTGGATGGAGGCGTTCTGGCTCAAATGGTGGTGGACAGGCTCCTGGTCCTTCTCCCAGTGTG
TCTCTCCCTGCTAGTTTAGGAAGAGGATGGGGTAGAGAAGAAAACCTTTTTTCTTGGAAGGGAGCTAGGGGACGGGGCAT
GCGGGGGAGAGGTCGAGGACGAGGGCATCCTGTTTCCTGTGTTGTAAATAGAAGCACTGACAACCAGAGGCAACAGCAAT
TAAATGACGTGGTAACAAATTCATCTACTATTATCCAGAATCCAGTAGAGACACCCAAGAAGGACTATAGTCTGTTACCA
CTGTTAGCAGCTGCCCCTCAAGTTGGAGAAAAGATTGCATTTAAGCTTTTGGAGCTAACATCCAGTTACTCTCCTGATGT
CTCTGACTACAAGGAAGGAAGAATATTAAGCCACAATCCAGAGACCCAGCAAGTAGATATAGAAATTCTTTCATCCTTAC
CTGCCTTGAGAGAACCTGGGAAATTTGATTTAGTTTATCACAATGAAAACGGAGCCGAGGTAGTGGAGTACGCTGTGACA
CAGGAGAGCAAGATCACTGTATTTTGGAGAGAGTTGATTGACCCAAGACTGATTATTGAATCTCCAAGTAACACATCAAG
TACAGAACCTGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .96 RPM
SRP007412_cerebellum 16 .54 RPM
SRP007412_heart 4 .43 RPM
SRP007412_kidney 8 .09 RPM
SRP007412_liver 6 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008740 ortholog_one2one 1 retrogene
retro_chof_1121,
Callithrix jacchus ENSCJAG00000013960 ortholog_one2one 1 retrogene
retro_cjac_2240,
Dasypus novemcinctus ENSDNOG00000023961 ortholog_one2many 1 retrogene
retro_dnov_1986,
Echinops telfairi ENSETEG00000003687 ortholog_one2one 1 retrogene
retro_etel_1537,
Nomascus leucogenys ENSNLEG00000008026 ortholog_one2one 1 retrogene
retro_nleu_1014,
Oryctolagus cuniculus ENSOCUG00000011345 ortholog_one2one 1 retrogene
retro_ocun_1798,
Tupaia belangeri ENSTBEG00000008882 ortholog_one2one 4 retrogenes
retro_tbel_2118, retro_tbel_3549, retro_tbel_3961, retro_tbel_838,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_305 91.84 74.36
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Download FASTA sequences of all ENSPPYG00000008248 retrocopies