Parental gene:

KARS, ENSPPYG00000007567

Aliases:None
Description:lysine--tRNA ligase [Source:RefSeq peptide;Acc:NP_001127155]
Organism:Orangutan (Pongo abelii)
Coordinates:16:63006235..63026133(-)


>ENSPPYG00000007567
ATGTTGACGCAAGCTGCTGTAAGGCTTGTTAGGGGGTCCCTTCGCAAAACCTCCTGGGCAGAGTGGGGTCACAGGGAACT
GCGACTGGGTCAACTTGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATTTTCTGATCAAAGAAGTGAGCTGAAGAGAC
GCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAACAGCTAAGCCAAGCCACC
GCTGCTGCCACCAACCACACCACTGACAATGGTGTGGGTCCTGAGGAAGAGAGCTTGGACCCAAATCAATACTACAAAAT
CCGCAGTCAAGCAGTTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCA
CTGACTTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATC
CATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAA
TTCCAGAAATTATAAATCAGAAGAAGAATTTATTCATATTAATAACAAACTGCGTCGGGGAGATATAATTGGAGTTCAGG
GGAATCCTGGTAAAACCAAGAAGGGTGAGCTGAGCATCATTCCGTATGAGATCACACTGCTGTCTCCCTGTTTGCATATG
TTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGTATCGCCAGAGATACTTGGACTTGATCCTGAATGACTT
TGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTCTTGGATGAGCTGGGATTCCTAGAGA
TTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATCACAACGAGCTGGACATG
AACTTATATATGAGAATTGCTCCAGAACTCTATCATAAGATACTTGTGGTTGGTGGCATCGACCGGGTTTATGAAATTGG
ACGCCAGTTCCGGAATGAGGGGATTGATTTGACGCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAG
ACTATCACGATCTCATGGAAATCACAGAGAAGATGGTTTCAGGGATGGTGAAGCATGTTACAGGCAGTTACAAGGTCACC
TACCACCCAGATGGCCCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGA
GCTTGAGAAAGCCCTGGGGATGAAGCTGCCAGAAACAAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATA
TCTGTGTGGCAAAAGCTGTTGAATGCCCTCCACCTCGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTG
GAAGTGACTTGCATCAATCCTACATTCATCTGTGATCACCCACAGATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAA
AGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCAATGCCTACACTGAGCTGAATGATCCCA
TGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCATGTTCATAGATGAAAAC
TTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGACCGAGTCGCCATGTTTCTCAC
GGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTG
ATACGCTGGAAAGCACAACAGTTGGCACTTCTGTCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 53 .47 RPM
SRP007412_cerebellum 52 .90 RPM
SRP007412_heart 56 .17 RPM
SRP007412_kidney 68 .61 RPM
SRP007412_liver 56 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013447 ortholog_one2one 1 retrogene
retro_chof_2324,
Callithrix jacchus ENSCJAG00000014213 ortholog_one2one 2 retrogenes
retro_cjac_4104, retro_cjac_608,
Homo sapiens ENSG00000065427 ortholog_one2one 1 retrogene
retro_hsap_1191,
Gorilla gorilla ENSGGOG00000005515 ortholog_one2one 1 retrogene
retro_ggor_930,
Mus musculus ENSMUSG00000031948 ortholog_one2one 8 retrogenes
retro_mmus_3536, retro_mmus_3537, retro_mmus_3538, retro_mmus_3539, retro_mmus_3540, retro_mmus_3541, retro_mmus_3542, retro_mmus_3543,
Nomascus leucogenys ENSNLEG00000013072 ortholog_one2one 1 retrogene
retro_nleu_2080,
Pan troglodytes ENSPTRG00000008364 ortholog_one2one 1 retrogene
retro_ptro_3036,
Pteropus vampyrus ENSPVAG00000006746 ortholog_one2one 2 retrogenes
retro_pvam_1301, retro_pvam_723,
Sorex araneus ENSSARG00000011493 ortholog_one2one 1 retrogene
retro_sara_415,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_992 79.77 83.20
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Download FASTA sequences of all ENSPPYG00000007567 retrocopies