Parental gene:

POLR2C, ENSPPYG00000007390

Aliases:None
Description:polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Source:HGNC Symbol;Acc:9189]
Organism:Orangutan (Pongo abelii)
Coordinates:16:44700094..44712738(+)


>ENSPPYG00000007390
ATGCCGTACGCCAACCAGCCTACCGTGCGGATCACGGAGCTCACTGACGAGAATGTCAAGTTCATCATCGAGAACACCGA
CCTGGCGGTGGCCAATTCGATTCGGAGGGTCTTCATCGCTGAGGTGCCCATAATAGCCATTGACTGGGTTCAGATTGATG
CCAATTCCTCAGTCCTTCATGATGAATTCATCGCTCACAGGCTTGGATTAATTCCCCTCATTAGTGATGACATTGTGGAC
AAGCTGCAGTACTCTCGGGACTGCACATGTGAGGAGTTCTGCCCCGAGTGCTCGGTGGAGTTCACCCTCGACGTGCGGTG
CAATGAAGACCAGACGCGACATGTCACATCTCGAGACCTCATCTCCAACAGCCCCCGGGTCATTCCGGTGACGTCCCGGA
ACCGAGATAATGACCCCAATGACTACGTGGAGCAGGATGACATCCTCATCGTCAAGTTGAGAAAGGGCCAGGAGCTGAGA
CTTCGAGCCTATGCCAAAAAGGGCTTTGGCAAGGAGCATGCCAAGTGGAACCCTACTGCAGGGGTGGCTTTTGAATACGA
TCCAGACAATGCCCTGAGGCACACAGTGTACCCCAAGCCCGAGGAATGGCCAAAGAGCGAGTACTCAGAGCTGGATGAGG
ATGAGTCGCAGGCTCCCTATGACCCCAACGGCAAGCCAGAAAGGTTTTATTACAACGTGGAGTCCTGTGGCTCTCTGCGT
CCTGAAACCATTGTCCTGTCAGCCCTCTCTGGATTGAAGAAGAAACTGAGTGATTTACAAACTCAATTAAGCCACGAGAT
CCAGAGTGATGTGCTAACCATAAATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 58 .61 RPM
SRP007412_cerebellum 61 .53 RPM
SRP007412_heart 21 .40 RPM
SRP007412_kidney 78 .13 RPM
SRP007412_liver 44 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008720 ortholog_one2one 1 retrogene
retro_cfam_688,
Choloepus hoffmanni ENSCHOG00000002986 ortholog_one2one 1 retrogene
retro_chof_1988,
Callithrix jacchus ENSCJAG00000012016 ortholog_one2one 1 retrogene
retro_cjac_2026,
Dipodomys ordii ENSDORG00000000081 ortholog_one2one 1 retrogene
retro_dord_704,
Echinops telfairi ENSETEG00000004185 ortholog_one2one 1 retrogene
retro_etel_1953,
Homo sapiens ENSG00000102978 ortholog_one2one 1 retrogene
retro_hsap_2496,
Gorilla gorilla ENSGGOG00000012415 ortholog_one2one 1 retrogene
retro_ggor_1557,
Myotis lucifugus ENSMLUG00000015833 ortholog_one2many 2 retrogenes
retro_mluc_129, retro_mluc_236,
Macaca mulatta ENSMMUG00000020474 ortholog_one2one 1 retrogene
retro_mmul_1674,
Mus musculus ENSMUSG00000031783 ortholog_one2one 1 retrogene
retro_mmus_1723,
Nomascus leucogenys ENSNLEG00000003034 ortholog_one2one 1 retrogene
retro_nleu_1431,
Otolemur garnettii ENSOGAG00000016866 ortholog_one2many 1 retrogene
retro_ogar_3361,
Ochotona princeps ENSOPRG00000006979 ortholog_one2one 1 retrogene
retro_opri_445,
Pan troglodytes ENSPTRG00000008157 ortholog_one2one 1 retrogene
retro_ptro_1448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1839 76.80 65.45
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Download FASTA sequences of all ENSPPYG00000007390 retrocopies