Parental gene:

RAB11A, ENSPPYG00000006573

Aliases:None
Description:Ras-related protein Rab-11A [Source:UniProtKB/Swiss-Prot;Acc:Q5R9M7]
Organism:Orangutan (Pongo abelii)
Coordinates:15:62992785..63012660(+)


>ENSPPYG00000006573
ATGGGCACCCGCGACGACGAGTACGACTACCTCTTTAAAGTTGTCCTTATTGGAGATTCTGGTGTTGGAAAGAGTAATCT
CCTGTCTCGATTTACTCGAAATGAGTTTAATCTGGAAAGCAAGAGCACCATTGGAGTAGAGTTTGCAACAAGAAGCATCC
AGGTTGATGGAAAAACAATAAAGGCACAGATATGGGACACAGCAGGGCAAGAGCGATACCGAGCTATAACATCAGCATAT
TATCGTGGAGCTGTAGGTGCCTTATTGGTTTATGACATTGCTAAACATCTCACATATGAAAATGTAGAGCGATGGCTGAA
AGAACTGAGAGATCATGCTGATAGTAACATTGTTATCATGCTTGTGGGCAATAAGAGTGATCTACGTCATCTCAGGGCAG
TTCCTACAGATGAAGCAAGAGCTTTTGCAGAAAAGAATGGTTTGTCATTCATTGAGACTTCGGCTCTAGACTCTACAAAT
GTAGAAGCTGCTTTTCAGACAATTTTAACAGAGATTTACCGCATTGTTTCTCAGAAGCAAATGTCAGACAGACGCGAAAA
TGACATGTCTCCAAGCAACAATGTGGTTCCTATTCATGTTCCACCAACCACTGAAAACAAGCCAAAGGTGCAGTGCTGTC
AGAACATCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 55 .51 RPM
SRP007412_cerebellum 65 .18 RPM
SRP007412_heart 31 .49 RPM
SRP007412_kidney 48 .63 RPM
SRP007412_liver 36 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018959 ortholog_one2one 1 retrogene
retro_btau_1850,
Callithrix jacchus ENSCJAG00000007333 ortholog_one2one 1 retrogene
retro_cjac_1050,
Echinops telfairi ENSETEG00000004920 ortholog_one2one 5 retrogenes
retro_etel_1150, retro_etel_2132, retro_etel_2214, retro_etel_694, retro_etel_837,
Homo sapiens ENSG00000103769 ortholog_one2one 1 retrogene
retro_hsap_715,
Gorilla gorilla ENSGGOG00000014252 ortholog_one2one 2 retrogenes
retro_ggor_538, retro_ggor_605,
Myotis lucifugus ENSMLUG00000008820 ortholog_one2one 2 retrogenes
retro_mluc_1606, retro_mluc_2435,
Macaca mulatta ENSMMUG00000008006 ortholog_one2one 1 retrogene
retro_mmul_2463,
Nomascus leucogenys ENSNLEG00000012853 ortholog_one2one 1 retrogene
retro_nleu_467,
Petromyzon marinus ENSPMAG00000009335 ortholog_one2many 1 retrogene
retro_pmar_25,
Pongo abelii ENSPPYG00000000128 other_paralog 1 retrogene
retro_pabe_3321,
Pongo abelii ENSPPYG00000018056 other_paralog 1 retrogene
retro_pabe_3574,
Pan troglodytes ENSPTRG00000007188 ortholog_one2one 1 retrogene
retro_ptro_510,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_618 81.76 78.24
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Download FASTA sequences of all ENSPPYG00000006573 retrocopies