Parental gene:

HDAC3, ENSPCAG00000010817

Aliases:None
Description:histone deacetylase 3 [Source:HGNC Symbol;Acc:4854]
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_837:148531..160835(-)


>ENSPCAG00000010817
ATGGCCAAGACCGTGGCCTATTTCTATGACCCGGACGTGGGCAACTTCCACTATGGGGCTGGACACCCTATGAAGCCCCA
TCGCCTGGCGTTGACCCATAGCCTGGTTCTGCACTACGGTCTCTATAAGAAGATGATCGTCTTCAAGCCATACCAGGCTT
CCCAGCATGACATGTGCCGCTTCCACTCTGAGGACTACATTGACTTCCTGCAGAGAGTCAGCCCCACCAATATGCAAGGC
TTCACCAAGAGCCTTAATGCCTTCAATGTGGGTGATGACTGCCCAGTGTTTCCCGGGCTGTTTGAATTCTGCTCCCGTTA
CACAGGTGCCTCTCTACAAGGAGCAACCCAGCTGAACAACAAGATCTGTGATATTGCCATTAACTGGGCTGGTGGTCTGC
ATCATGCCAAGAAGTTTGAGGCTTCGGGCTTCTGCTATGTCAACGACATTGTAATTGGGATCCTGGAACTGCTCAAGTAC
CACCCTCGGGTTCTCTACATTGATATTGACATCCACCATGGTGATGGGGTTCAGGAAGCCTTCTACCTCACTGACCGGGT
CATGACAGTGTCCTTCCACAAATATGGAAATTACTTCTTCCCTGGTACAGGTGACATGTATGAAGTCGGAGCGGAGAGCG
GTCGCTACTATTGTCTCAATGTGCCCCTGCGGGATGGCATTGATGACCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATGTGTCGAATATGTCAAGAGCTTCAATATCCCTCTACTGGTGCTAG
GTGGTGGTGGCTACACTGTGCGAAATGTTGCACGCTGCTGGACTTACGAGACATCACTGCTGGTAGAAGAAGCAATTAGC
GAGGAACTTCCCTATAGTGAATACTTCGAATACTTTGCCCCGGACTTCACACTCCATCCGGATGTCAGCACTCGCATTGA
AAATCAGAACTCACGCCAGTATCTGGACCAGATCCGTCAGACAATCTTTGAGAACCTGAAGATGCTTAACCATGCACCTA
GTGTCCAGATTCATGATGTGCCCTCAGACCTCTTGACCTATGACAGGACTGATGAGGCTGATGCAGAGGAGAGGGGTCCT
GAGGAGAACTACAGCAGGCCAGAGGCACCCAATGAGTTCTACGATGGAGACCATGACAATGACAAGGAAAGTGACGTGGA
AATTTAA

Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000008662 ortholog_one2one 1 retrogene
retro_mluc_642,
Macaca mulatta ENSMMUG00000012588 ortholog_one2many 1 retrogene
retro_mmul_49,
Ictidomys tridecemlineatus ENSSTOG00000016240 ortholog_one2one 1 retrogene
retro_itri_1661,
Tupaia belangeri ENSTBEG00000007520 ortholog_one2one 1 retrogene
retro_tbel_1811,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_298 86.09 53.74
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Download FASTA sequences of all ENSPCAG00000010817 retrocopies