Parental gene: | OGFOD1, ENSOPRG00000006697 |
| Aliases: | None |
| Description: | 2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:HGNC Symbol;Acc:25585] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_3775:40496..65246(+) |
>ENSOPRG00000006697
ATGAATGGGAAACGGCCCGCAGAGCCCGGGCCGGGCCGCGGAGGGAAAAGGGGCAAGAAGGAAGTTATTGCGGAGTTTTC
TGACGCTGTCACGGAGGAAACCTTGAAGAAGCAGGTGGCTGAAGCGTGGACAAGCAGGACGCCGTTCAGCCACGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGCTCATGTTTGAAGATTTCCGAGCCTGGCTTTCAGATGTCTCTCAGATTG
ACCTGGAACCAACCATTGACATGTCCTGTGCTAAATATGAATTCACCGATGCCCTGCTGTGCCATGACGACGAGTTGGAG
GGACGCCGGATCGCCTTCATTCTGTACCTCGTTCCTTCCTGGGACAGGAGTTTTGGGGGCACCCTGGATCTGTACGACAC
TGATGAACACTTTCAGCCGAAGCAGATTGTCAAGTCTCTTATCCCTTCGTGGAACAAATTGATTTTCTTTGAAGTGTCTC
CGGTGTCCTTTCATCAGGTGTCTGAAGTCCTCTCTGAGGAGAAGTCCCGTCTGTCTATAAGCGGCTGGTTTCACGGTGCT
TCGCTAACCAGGCCCCCCATCTACTTCGAACCCCTCATTCCTCGGAACCCTCACATCCCAAAAGATCATGAGATTTTGTA
TGATTGGATCAATCCTACTTATCTGGACATGGAGTACCAAGTTCAAATTCAAGAGGAATTTGAAGAAAGTTCTGAAATTC
TCCTGAAGGAATTTCTTAAGCCTGAGAAATTTGCAAAGGTCTGTGAGGCCTTGGAGAAAGCAGATGTGGAATGGAACACC
CGCAGTCCTCCTAACAAAAGGTTTTACGAGAAGGCTGAGGAAAGCACACTGCCTGACATCCTGAAGGAGTGCATGGAGTT
ATTTCGCTCCGAGGCAATGTTCTTGCTGCTCTCCAACTTCACAGGCCTGAAGCTTCACTTCCTGGCCCCCTCAGAGGACA
GTGAGACTGAGGACAAAAAAGAGGGAGAAGCAGCCTCAACTGCAGAGAACACGGAAGAGGGGGCCGGCCAGAGCTCCTCT
GAGCCCGGGCTTCCTGAGGCGGCCATCAGCAGCAGCAGCCAGCAGAGCGACGGAGAAGTGGAGTCACAGTCTGAGGAGAA
AGAAGCAAAGAAAGACTCAGGTGTTCCCACATGTCAAGGGGAGCTGAGGCATTGGAAGACTGGTCACTACACTTTAATCC
ATGACAACAGCAAGACCGAATTTGCCCTGGACTTACTTTTTTACTGTGGTTGTGAAGGCTGGGATCCAGAATTTGGTGGC
TTTACTTCCTACATTGCCAAAGGTGAAGATGAAGAG
ATGAATGGGAAACGGCCCGCAGAGCCCGGGCCGGGCCGCGGAGGGAAAAGGGGCAAGAAGGAAGTTATTGCGGAGTTTTC
TGACGCTGTCACGGAGGAAACCTTGAAGAAGCAGGTGGCTGAAGCGTGGACAAGCAGGACGCCGTTCAGCCACGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGCTCATGTTTGAAGATTTCCGAGCCTGGCTTTCAGATGTCTCTCAGATTG
ACCTGGAACCAACCATTGACATGTCCTGTGCTAAATATGAATTCACCGATGCCCTGCTGTGCCATGACGACGAGTTGGAG
GGACGCCGGATCGCCTTCATTCTGTACCTCGTTCCTTCCTGGGACAGGAGTTTTGGGGGCACCCTGGATCTGTACGACAC
TGATGAACACTTTCAGCCGAAGCAGATTGTCAAGTCTCTTATCCCTTCGTGGAACAAATTGATTTTCTTTGAAGTGTCTC
CGGTGTCCTTTCATCAGGTGTCTGAAGTCCTCTCTGAGGAGAAGTCCCGTCTGTCTATAAGCGGCTGGTTTCACGGTGCT
TCGCTAACCAGGCCCCCCATCTACTTCGAACCCCTCATTCCTCGGAACCCTCACATCCCAAAAGATCATGAGATTTTGTA
TGATTGGATCAATCCTACTTATCTGGACATGGAGTACCAAGTTCAAATTCAAGAGGAATTTGAAGAAAGTTCTGAAATTC
TCCTGAAGGAATTTCTTAAGCCTGAGAAATTTGCAAAGGTCTGTGAGGCCTTGGAGAAAGCAGATGTGGAATGGAACACC
CGCAGTCCTCCTAACAAAAGGTTTTACGAGAAGGCTGAGGAAAGCACACTGCCTGACATCCTGAAGGAGTGCATGGAGTT
ATTTCGCTCCGAGGCAATGTTCTTGCTGCTCTCCAACTTCACAGGCCTGAAGCTTCACTTCCTGGCCCCCTCAGAGGACA
GTGAGACTGAGGACAAAAAAGAGGGAGAAGCAGCCTCAACTGCAGAGAACACGGAAGAGGGGGCCGGCCAGAGCTCCTCT
GAGCCCGGGCTTCCTGAGGCGGCCATCAGCAGCAGCAGCCAGCAGAGCGACGGAGAAGTGGAGTCACAGTCTGAGGAGAA
AGAAGCAAAGAAAGACTCAGGTGTTCCCACATGTCAAGGGGAGCTGAGGCATTGGAAGACTGGTCACTACACTTTAATCC
ATGACAACAGCAAGACCGAATTTGCCCTGGACTTACTTTTTTACTGTGGTTGTGAAGGCTGGGATCCAGAATTTGGTGGC
TTTACTTCCTACATTGCCAAAGGTGAAGATGAAGAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000013378 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014894 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_1103 | 89.94 | 63.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000006697 retrocopies