Parental gene: | ENSOPRG00000005256 |
| Aliases: | None |
| Description: | None |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_2258:34410..80030(+) |
>ENSOPRG00000005256
ATGAATAAGCATCAGAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGATGAAAAAGAGAAATTCGAACC
CACAGTCTTCAGGGATACACTTGTCCAGGGACTTAACGAAGCTGGTGATGACCTTGAAGCTGTAGCCAAGTTTCTGGACT
CCACTGGCTCCAGGTTGGATTACCGCCGTTATGCCGACACCCTCTTCGACATCCTGGTGGCTGGCAGCATGCTTGCCCCA
GGAGGAACACGCATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTCTCAGCAAATGAAGATCACGAGAC
CATTCGGAATTATGCTCAGGTCTTCAACAAACTCATCAGGAGATACAAGTATTTGGAAAAGGCATTCGAGGATGAAATGA
AAAAGCTTCTCCTCTTCCTTAAAGCCTTTTCTGAAACAGAGCAGACAAAATTGGCGATGCTGTCCGGGATCCTGCTGGGC
AATGGCACCCTTCCAGCCAGCATCCTCACCAGCCTCTTCACCGACAACCTGGTCAAGGAAGGCATCGCGGCCTCGTTTGC
CGTCAAGCTCAAGGCCTGGATGGCAGAGAAAGACGCCAACTCTGTTACCTCCTCGCTGAGAAAAGCCAACCTTGACAAGA
GGCTGCTTGAACTCTTTCCGGTTAACCGGCAGAGCGTGGATCATTTTGCTAAGTACTTCACTGACGCGGGCCTCAAGGAG
CTGTCCGACTTCCTCCGGGTGCAGCAGTCCCTGGGCACCAGGAAAGAGCTACAGAAGGAGCTCCAGGAGCGGCTCTCACA
GGAGTGCCCCATCAAGGAGGTGGTGCTTTACGTCAAAGAAGAAATGAAGAGGAATGAGCTTCCGGAAACGGCGGTGATTG
GACTCCTGTGGGCCTGCATCATGAATGCCGTGGAGTGGAACAAGAAGGAAGAGCTGGTCGCCGAGCAAGCTCTCAAGCAC
CTGAAGCAATACGCTCCCCTCCTGGCTGTGTTCAGCTCCCAAGGCCAGTCGGAGCTGGCCCTGCTGCAGAAGGTCCAGGA
GTACTGCTACGACAACATCCACTTCATGAAGGCCTTTCAGAAGATCGTGGTTCTCTTCTACAAAGCTGATGTTCTGAGTG
AAGAAGCAATACTGAAATGGTATAAAGAAGCCCACGTTGCCAAAGGCAAAAGTGTTTTCCTTGACCAGATGAAGAAGTTT
GTGGAGTGGTTGCAGAACGCAGAAGAAGAGTCTGAATCGGAAGGTGAAGAAAACTAA
ATGAATAAGCATCAGAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGATGAAAAAGAGAAATTCGAACC
CACAGTCTTCAGGGATACACTTGTCCAGGGACTTAACGAAGCTGGTGATGACCTTGAAGCTGTAGCCAAGTTTCTGGACT
CCACTGGCTCCAGGTTGGATTACCGCCGTTATGCCGACACCCTCTTCGACATCCTGGTGGCTGGCAGCATGCTTGCCCCA
GGAGGAACACGCATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTCTCAGCAAATGAAGATCACGAGAC
CATTCGGAATTATGCTCAGGTCTTCAACAAACTCATCAGGAGATACAAGTATTTGGAAAAGGCATTCGAGGATGAAATGA
AAAAGCTTCTCCTCTTCCTTAAAGCCTTTTCTGAAACAGAGCAGACAAAATTGGCGATGCTGTCCGGGATCCTGCTGGGC
AATGGCACCCTTCCAGCCAGCATCCTCACCAGCCTCTTCACCGACAACCTGGTCAAGGAAGGCATCGCGGCCTCGTTTGC
CGTCAAGCTCAAGGCCTGGATGGCAGAGAAAGACGCCAACTCTGTTACCTCCTCGCTGAGAAAAGCCAACCTTGACAAGA
GGCTGCTTGAACTCTTTCCGGTTAACCGGCAGAGCGTGGATCATTTTGCTAAGTACTTCACTGACGCGGGCCTCAAGGAG
CTGTCCGACTTCCTCCGGGTGCAGCAGTCCCTGGGCACCAGGAAAGAGCTACAGAAGGAGCTCCAGGAGCGGCTCTCACA
GGAGTGCCCCATCAAGGAGGTGGTGCTTTACGTCAAAGAAGAAATGAAGAGGAATGAGCTTCCGGAAACGGCGGTGATTG
GACTCCTGTGGGCCTGCATCATGAATGCCGTGGAGTGGAACAAGAAGGAAGAGCTGGTCGCCGAGCAAGCTCTCAAGCAC
CTGAAGCAATACGCTCCCCTCCTGGCTGTGTTCAGCTCCCAAGGCCAGTCGGAGCTGGCCCTGCTGCAGAAGGTCCAGGA
GTACTGCTACGACAACATCCACTTCATGAAGGCCTTTCAGAAGATCGTGGTTCTCTTCTACAAAGCTGATGTTCTGAGTG
AAGAAGCAATACTGAAATGGTATAAAGAAGCCCACGTTGCCAAAGGCAAAAGTGTTTTCCTTGACCAGATGAAGAAGTTT
GTGGAGTGGTTGCAGAACGCAGAAGAAGAGTCTGAATCGGAAGGTGAAGAAAACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000001663 | ortholog_one2many | 4 retrogenes | |
| Equus caballus | ENSECAG00000022038 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017045 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017763 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000014571 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000002506 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009806 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009867 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_9 | 99.30 | 67.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_665 | 99.33 | 70.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000005256 retrocopies