Parental gene: | CDK5RAP3, ENSOPRG00000004107 |
| Aliases: | None |
| Description: | CDK5 regulatory subunit associated protein 3 [Source:HGNC Symbol;Acc:18673] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_1569:478572..486400(+) |
>ENSOPRG00000004107
ATGCAGGATCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNACATTCACTACTTCCACTGCCTCCGCATCGTGGAGCTTCTCAAAGGCACCGAAGCC
TCCACCAAGAATATTTTTGGCCGGTACTCGTCACAGCGGATGAAGGATTGGCAGGAGATTGTAGCCCTGTACGAGAAAGA
CAACACCTACTTAGTGGAACTCTGTAGCCTCCTGGTTCGGAACGTCAGCTATGAGATCCCCTCACTGAAGAAGCAGATTG
CCAAGTGCCAGCAGCTGCAGCAGGAGTACAGCCGCAAAGAGGAGGAGGGCCAGGCAGGGGCCGCCGAGCTGCGGGAGCGG
TTCCATCACTCGTGCAAGCAGTATGGCATCACGGGAGACAATGTGCGGAGGGAACTGCTGGCTCTGGTGAATGACCTGCC
GGGGCAGCTGGCTGAGATCGGGGCAGCGGCTCAGTCACTGGGAGAGGCCATTGACCTGTACCAGGCCTGCGTGGGCTTCG
TGTGTGAAAGCCCCACGGAGCAGGTGCTGCCGATGCTGCGTTATGTACAGGAGCGGGGGAACTCCACAGTGTACGAGTGG
AGGACGGGCATGGAGCCCTCTGTAGTGGAGCGGACACACCGGGAGAAGCCTTCCGAGCAACTGGGAGAGGATGCGATCGA
CTGGGGTGACTTCGGGATGGAGCCAGCTTTGCAGGCCACTGACTCTGGCATCTCTACTGAGGCTACTGGCATCGACTGGG
GCATCTCCCTGGAATCAGATCCAAAGGACTCTGGGGGTGATGGCATCGACTGGGGAGATGACGTGGCCACGTCGCAGATC
ACAGTGGTGGAAGCAGGAACTGAGGCTCCAGAAGGTGTCGCTCGGGGCCCAGACGCCCTTACACTCCTTGAATATCCAGA
GACCCGAAATCAGTTCATTGATGAGCTCATGGAGCTTGAGATCTTCCTGTCCCAGAGAGCGGTGGAGATGAGCGAGGAGG
CAGACATCCTGGCCATGAGCCAGTTCCAGCTGGCTCCCGCCATCCTGCAGGGCCAGACCAAAGAGCAGATGGTTACCATG
GTGGCGACACTGCAGGATCTGATAGGCCGGCTCACCAACCTGCGAATGCAGCACCTGTTTATGATCCTGGCCTCGCCCAG
GTACGTGGACCGAGTGACCGAGTTCCTCCAGCAGAAGCTGAAGCAGTCCCAGCTGCTGGCACTCAAGAAGGAGCTGATGG
TGCAGCGGCAGCAGGAGGCTCTTCAGGAGCAGGCGGCTCTGGAGCCCAAGCTGGACCTGCTGCTGGAGAAGACCAAGGAG
CTCCAGAAGCTGATTGAGGCCGACATCTCCAAGAGGTACGGCGGGCGCCCTGTGAATCTGATGGGAACCTCGCTGTGA
ATGCAGGATCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNACATTCACTACTTCCACTGCCTCCGCATCGTGGAGCTTCTCAAAGGCACCGAAGCC
TCCACCAAGAATATTTTTGGCCGGTACTCGTCACAGCGGATGAAGGATTGGCAGGAGATTGTAGCCCTGTACGAGAAAGA
CAACACCTACTTAGTGGAACTCTGTAGCCTCCTGGTTCGGAACGTCAGCTATGAGATCCCCTCACTGAAGAAGCAGATTG
CCAAGTGCCAGCAGCTGCAGCAGGAGTACAGCCGCAAAGAGGAGGAGGGCCAGGCAGGGGCCGCCGAGCTGCGGGAGCGG
TTCCATCACTCGTGCAAGCAGTATGGCATCACGGGAGACAATGTGCGGAGGGAACTGCTGGCTCTGGTGAATGACCTGCC
GGGGCAGCTGGCTGAGATCGGGGCAGCGGCTCAGTCACTGGGAGAGGCCATTGACCTGTACCAGGCCTGCGTGGGCTTCG
TGTGTGAAAGCCCCACGGAGCAGGTGCTGCCGATGCTGCGTTATGTACAGGAGCGGGGGAACTCCACAGTGTACGAGTGG
AGGACGGGCATGGAGCCCTCTGTAGTGGAGCGGACACACCGGGAGAAGCCTTCCGAGCAACTGGGAGAGGATGCGATCGA
CTGGGGTGACTTCGGGATGGAGCCAGCTTTGCAGGCCACTGACTCTGGCATCTCTACTGAGGCTACTGGCATCGACTGGG
GCATCTCCCTGGAATCAGATCCAAAGGACTCTGGGGGTGATGGCATCGACTGGGGAGATGACGTGGCCACGTCGCAGATC
ACAGTGGTGGAAGCAGGAACTGAGGCTCCAGAAGGTGTCGCTCGGGGCCCAGACGCCCTTACACTCCTTGAATATCCAGA
GACCCGAAATCAGTTCATTGATGAGCTCATGGAGCTTGAGATCTTCCTGTCCCAGAGAGCGGTGGAGATGAGCGAGGAGG
CAGACATCCTGGCCATGAGCCAGTTCCAGCTGGCTCCCGCCATCCTGCAGGGCCAGACCAAAGAGCAGATGGTTACCATG
GTGGCGACACTGCAGGATCTGATAGGCCGGCTCACCAACCTGCGAATGCAGCACCTGTTTATGATCCTGGCCTCGCCCAG
GTACGTGGACCGAGTGACCGAGTTCCTCCAGCAGAAGCTGAAGCAGTCCCAGCTGCTGGCACTCAAGAAGGAGCTGATGG
TGCAGCGGCAGCAGGAGGCTCTTCAGGAGCAGGCGGCTCTGGAGCCCAAGCTGGACCTGCTGCTGGAGAAGACCAAGGAG
CTCCAGAAGCTGATTGAGGCCGACATCTCCAAGAGGTACGGCGGGCGCCCTGTGAATCTGATGGGAACCTCGCTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000108465 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022994 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002109 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008888 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009345 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_276 | 91.81 | 69.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_480 | 91.81 | 69.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000004107 retrocopies