Parental gene:

RPS6, ENSOGAG00000016254

Aliases:None
Description:ribosomal protein S6 [Source:HGNC Symbol;Acc:10429]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873525.1:8497988..8501467(+)


>ENSOGAG00000016254
ATGAAGCTGAACATCTCCTTCCCAGCCACTGGCTGCCAGAAACTCATTGAAGTGGACGATGAACGCAAACTTCGTACTTT
CTATGAGAAGCGCATGGCCACAGAAGTTGCTGCTGACGCGCTGGGTGAAGAATGGAAGGGTTATGTGGTCCGAATCAGTG
GTGGGAACGACAAGCAAGGTTTCCCCATGAAACAGGGTGTCTTAACCCATGGCCGGGTCCGCCTGCTGCTGAGTAAGGGG
CATTCCTGTTATAGACCAAGGAGAACTGGAGAAAGGAAGCGCAAATCTGTTCGGGGTTGCATTGTGGATGCCAATCTGAG
TGTTCTCAACTTGGTTATTGTAAAAAAAGGAGAGAAGGATATTCCTGGACTGACTGACACCACGGTACCTAGGCGTCTGG
GGCCTAAAAGAGCTAGCAGAATCCGCAAACTTTTCAATCTGTCTAAAGAAGATGATGTTCGCCAATACGTTGTGAGAAAG
CCCTTAAACAAAGAAGGTAAGAAACCTAGGACCAAAGCACCCAAGATTCAGCGTCTTGTAACTCCGCGTGTCTTGCAACA
TAAGCGCCGGCGTATTGCTCTGAAGAAACAGCGAACTAAGAAAAATAAGGAAGAGGCTGCAGAATATGCTAAACTTTTGG
CCAAGAGAATGAAGGAGGCCAAAGAAAAGCGCCAGGAACAGATTGCCAAGAGACGCAGGCTGTCCTCTCTGAGAGCTTCC
ACTTCTAAGTCTGAATCCAGTCAAAAATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000017634 possible_ortholog 1 retrogene
retro_acar_20,
Choloepus hoffmanni ENSCHOG00000004622 ortholog_one2one 15 retrogenes
retro_chof_1018, retro_chof_1101, retro_chof_1107, retro_chof_1590, retro_chof_193, retro_chof_2036, retro_chof_2037, retro_chof_2051, retro_chof_2188, retro_chof_2363, retro_chof_2455, retro_chof_2486, retro_chof_2608, retro_chof_849, retro_chof_941,
Cavia porcellus ENSCPOG00000003750 possible_ortholog 4 retrogenes
retro_cpor_1244, retro_cpor_22, retro_cpor_317, retro_cpor_486,
Dipodomys ordii ENSDORG00000012057 ortholog_one2one 2 retrogenes
retro_dord_37, retro_dord_452,
Ficedula albicollis ENSFALG00000003078 possible_ortholog 1 retrogene
retro_falb_24,
Loxodonta africana ENSLAFG00000010766 possible_ortholog 4 retrogenes
retro_lafr_1021, retro_lafr_1239, retro_lafr_59, retro_lafr_667,
Myotis lucifugus ENSMLUG00000007588 ortholog_one2one 27 retrogenes
retro_mluc_1041, retro_mluc_1146, retro_mluc_1169, retro_mluc_1393, retro_mluc_1411, retro_mluc_1448, retro_mluc_1472, retro_mluc_1532, retro_mluc_1566, retro_mluc_1593, retro_mluc_1629, retro_mluc_1635, retro_mluc_1723, retro_mluc_1799, retro_mluc_1909, retro_mluc_1928, retro_mluc_1933, retro_mluc_2110, retro_mluc_2129, retro_mluc_490, retro_mluc_493, retro_mluc_514, retro_mluc_557, retro_mluc_652, retro_mluc_678, retro_mluc_722, retro_mluc_830,
Monodelphis domestica ENSMODG00000004095 possible_ortholog 1 retrogene
retro_mdom_301,
Nomascus leucogenys ENSNLEG00000017532 ortholog_one2one 14 retrogenes
retro_nleu_1033, retro_nleu_1333, retro_nleu_1613, retro_nleu_226, retro_nleu_2471, retro_nleu_252, retro_nleu_2536, retro_nleu_2611, retro_nleu_2652, retro_nleu_2655, retro_nleu_2860, retro_nleu_313, retro_nleu_476, retro_nleu_546,
Ochotona princeps ENSOPRG00000012290 possible_ortholog 5 retrogenes
retro_opri_123, retro_opri_642, retro_opri_78, retro_opri_862, retro_opri_895,
Sarcophilus harrisii ENSSHAG00000005486 possible_ortholog 1 retrogene
retro_shar_549,
Tursiops truncatus ENSTTRG00000001787 ortholog_one2one 11 retrogenes
retro_ttru_1024, retro_ttru_107, retro_ttru_1275, retro_ttru_370, retro_ttru_468, retro_ttru_587, retro_ttru_748, retro_ttru_786, retro_ttru_878, retro_ttru_905, retro_ttru_934,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_462 72.57 69.48
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2. retro_ogar_575 80.72 98.80
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3. retro_ogar_782 84.55 87.55
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4. retro_ogar_1208 79.66 70.28
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5. retro_ogar_1222 79.10 53.41
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6. retro_ogar_1335 82.71 53.41
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7. retro_ogar_1356 98.50 53.41
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8. retro_ogar_1359 74.40 100.00
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9. retro_ogar_1439 74.80 50.20
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10. retro_ogar_1526 73.71 100.00
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11. retro_ogar_1531 73.12 100.00
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12. retro_ogar_1612 64.20 63.45
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13. retro_ogar_1979 71.59 70.28
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14. retro_ogar_2174 64.88 80.72
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15. retro_ogar_2195 82.76 58.23
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16. retro_ogar_2248 76.59 99.20
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17. retro_ogar_2264 85.29 53.82
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18. retro_ogar_2514 63.57 51.00
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19. retro_ogar_2707 83.21 52.21
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20. retro_ogar_2853 86.03 54.22
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21. retro_ogar_3329 76.89 100.00
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Download FASTA sequences of all ENSOGAG00000016254 retrocopies