Parental gene: | DNMT3A, ENSOCUG00000024688 |
| Aliases: | None |
| Description: | DNA (cytosine-5-)-methyltransferase 3 alpha [Source:HGNC Symbol;Acc:2978] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 2:174257179..174323385(-) |
>ENSOCUG00000024688
CTGCCCGCCATGCCCTCCAGCGGCCCCGGGGACACCAGCAGCTCCGCTCCGGAGCGGGACGAGGACCGAAAGGAAGGAGA
AGAGCAGGAGGAGCCTCGTGGCAAAGAGGAGCGGCAGGAGCCCAGCACCACCGCCCGGAAAGTGGGCAGGCCCGGGAGGA
AGCGCAAGCACCCGCCGGTGGAAAGCAGCGACACGCCCAAGGACCCTGCGGTCACCTCCAAGTCCCCGTCCATGGCCCAG
GACTCAGGCCCCTCCGAGCTGTTACCCAACGGGGACTTGGAGAAGCGGAGTGAGCCCCAGCCGGAGGAGGGGAGCCCTGC
TGGGGGGCAGAAGGGCGGGGCCCCAGCTGAGGGCGAGGGTGCAGCCGAGGCCCCGCCCGAAGCCTCCAGAGCGGTGGAGA
ATGGCTGCTGCACCCCGAAGGAGGGCCGAGGAGCCCCTGCAGGCGAGGGCAAAGAACAGAAGGAGACCAATGTGGAATCC
ATGAAAATGGAGGGCTCCCGGGGCCGGCTGCGGGGCGGCCTGGGCTGGGAGTCCAGCCTCCGCCAGCGGCCCATGCCGCG
GCTCACCTTCCAGGCGGGCGACCCCTACTACATCAGCAAACGCAAGCGGGACGAGTGGCTGGCACGCTGGAAAAGGGAGG
CTGAGAAGAAAGCCAAGGTCATTGCCGTGATGAATGCTGTAGAAGAGAGCCAGGGGTCCGGGGAGCCCCAGAAGGTGGAG
GAGGCCAGCCCTCCTGCTGTGCAGCAGCCCACCGACCCCGCCTCCCCCACTGTGGCCACTACGCCCGAGCCTGTGGGGGC
TGATGCCGGGGACAAGAACGCCACCAAAGCAGCCGACGACGAGCCGGAGTACGAGGACGGCCGGGGCTTTGGCATTGGGG
AGCTGGTGTGGGGGAAACTGCGGGGCTTCTCCTGGTGGCCAGGCCGCATAGTGTCCTGGTGGATGACGGGCCGGAGCCGT
GCAGCCGAGGGGACCCGCTGGGTCATGTGGTTCGGAGACGGCAAGTTCTCAGTGGTGTGCGTGGAGAAGCTGATGCCGCT
GAGTTCGTTCTGCAGCGCCTTCCACCAGGCCACCTACAACAAGCAGCCCATGTACCGCAAGGCCATCTACGAAGTCCTGC
AGGTGGCCAGCAGCCGCGCGGGCAAGCTCTTCCCGGCCTGCCATGACAGTGACGAGAGCGATACTGCCAAGGCCGTGGAG
GTGCAGAACAAGCAGATGATCGAGTGGGCCCTTGGGGGATTCCAGCCCTCGGGCCCCAAGGGCCTGGAGCCACCAGAAGA
GGAGAAGAACCCCTACAAAGAAGTTTACACGGACATGTGGGTGGAACCCGAGGCAGCCGCCTACGCCCCACCCCCACCAG
CCAAAAAACCACGGAAGAGCACGACGGAGAAGCCCAAGGTCAAGGAGATCATTGATGAGCGCACACGAGAGCGGCTGGTG
TACGAGGTGCGGCAAAAGTGCCGGAACATCGAGGACATCTGCATCTCGTGTGGGAGCCTCAATGTCACCCTGGAACACCC
CCTCTTCATTGGAGGAATGTGCCAAAATTGCAAGAACTGTTTCCTGGAATGCGCCTACCAGTACGACGATGATGGCTATC
AGTCATACTGCACCATCTGCTGCGGGGGGCGCGAGGTGCTCATGTGTGGGAACAACAACTGCTGCCGGTGCTTCTGTGTG
GAGTGTGTGGACCTCTTGGTGGGGCCGGGGGCTGCACAGGCGGCCATTAAGGAAGACCCCTGGAACTGCTACATGTGTGG
CCACAAGGGCACCTACGGGCTGCTGCGGCGTCGGGACGACTGGCCCTCTCGGCTCCAGATGTTCTTCGCCAATAACCACG
ACCAGGAATTCGACCCTCCGAAGGTTTACCCGCCTGTCCCAGCTGAAAAGAGGAAGCCCATCCGGGTGCTGTCTCTCTTT
GATGGAATTGCTACAGGGCTCCTGGTGCTGAAGGACTTGGGCATCCAGGTGGACCGCTACATCGCCTCAGAGGTGTGCGA
GGACTCCATCACGGTGGGCATGGTGCGGCACCAGGGGAAGATCATGTACGTGGGGGACGTCCGCAGCGTCACACAGAAGC
ACATCCAGGAATGGGGCCCATTTGACCTTGTGATCGGGGGCAGCCCCTGCAACGACCTCTCCATTGTCAACCCTGCCCGC
AAGGGGCTGTATGAGGGCACTGGCCGGCTCTTCTTTGAGTTCTACCGCCTCCTGCATGACGCGCGGCCCAAGGAGGGAGA
TGATCGCCCCTTCTTCTGGCTCTTTGAGAATGTGGTGGCCATGGGCGTTAGTGACAAGAGGGACATCTCACGATTTCTCG
AGTCCAACCCCGTCATGATTGATGCCAAAGAAGTGTCGGCCGCACACAGGGCCCGCTACTTCTGGGGTAACCTTCCCGGT
ATGAACAGGCCGTTGGCATCCACTGTGAATGATAAGCTGGAGCTGCAGGAGTGTCTGGAGCATGGCAGGATAGCCAAGTT
CAGCAAAGTGAGGACCATCACTACCAGGTCAAACTCCATAAAGCAGGGCAAAGACCAGCACTTCCCCGTCTTCATGAACG
AGAAGGAGGACATCCTGTGGTGCACTGAGATGGAAAGGGTGTTTGGCTTTCCTGTGCACTATACCGACGTCTCCAACATG
AGCCGCTTGGCGAGACAGAGGCTGCTGGGCCGGTCGTGGAGCGTGCCCGTGATCCGCCACCTCTTCGCTCCGCTGAAGGA
ATACTTTGCTTGTGTGTAA
CTGCCCGCCATGCCCTCCAGCGGCCCCGGGGACACCAGCAGCTCCGCTCCGGAGCGGGACGAGGACCGAAAGGAAGGAGA
AGAGCAGGAGGAGCCTCGTGGCAAAGAGGAGCGGCAGGAGCCCAGCACCACCGCCCGGAAAGTGGGCAGGCCCGGGAGGA
AGCGCAAGCACCCGCCGGTGGAAAGCAGCGACACGCCCAAGGACCCTGCGGTCACCTCCAAGTCCCCGTCCATGGCCCAG
GACTCAGGCCCCTCCGAGCTGTTACCCAACGGGGACTTGGAGAAGCGGAGTGAGCCCCAGCCGGAGGAGGGGAGCCCTGC
TGGGGGGCAGAAGGGCGGGGCCCCAGCTGAGGGCGAGGGTGCAGCCGAGGCCCCGCCCGAAGCCTCCAGAGCGGTGGAGA
ATGGCTGCTGCACCCCGAAGGAGGGCCGAGGAGCCCCTGCAGGCGAGGGCAAAGAACAGAAGGAGACCAATGTGGAATCC
ATGAAAATGGAGGGCTCCCGGGGCCGGCTGCGGGGCGGCCTGGGCTGGGAGTCCAGCCTCCGCCAGCGGCCCATGCCGCG
GCTCACCTTCCAGGCGGGCGACCCCTACTACATCAGCAAACGCAAGCGGGACGAGTGGCTGGCACGCTGGAAAAGGGAGG
CTGAGAAGAAAGCCAAGGTCATTGCCGTGATGAATGCTGTAGAAGAGAGCCAGGGGTCCGGGGAGCCCCAGAAGGTGGAG
GAGGCCAGCCCTCCTGCTGTGCAGCAGCCCACCGACCCCGCCTCCCCCACTGTGGCCACTACGCCCGAGCCTGTGGGGGC
TGATGCCGGGGACAAGAACGCCACCAAAGCAGCCGACGACGAGCCGGAGTACGAGGACGGCCGGGGCTTTGGCATTGGGG
AGCTGGTGTGGGGGAAACTGCGGGGCTTCTCCTGGTGGCCAGGCCGCATAGTGTCCTGGTGGATGACGGGCCGGAGCCGT
GCAGCCGAGGGGACCCGCTGGGTCATGTGGTTCGGAGACGGCAAGTTCTCAGTGGTGTGCGTGGAGAAGCTGATGCCGCT
GAGTTCGTTCTGCAGCGCCTTCCACCAGGCCACCTACAACAAGCAGCCCATGTACCGCAAGGCCATCTACGAAGTCCTGC
AGGTGGCCAGCAGCCGCGCGGGCAAGCTCTTCCCGGCCTGCCATGACAGTGACGAGAGCGATACTGCCAAGGCCGTGGAG
GTGCAGAACAAGCAGATGATCGAGTGGGCCCTTGGGGGATTCCAGCCCTCGGGCCCCAAGGGCCTGGAGCCACCAGAAGA
GGAGAAGAACCCCTACAAAGAAGTTTACACGGACATGTGGGTGGAACCCGAGGCAGCCGCCTACGCCCCACCCCCACCAG
CCAAAAAACCACGGAAGAGCACGACGGAGAAGCCCAAGGTCAAGGAGATCATTGATGAGCGCACACGAGAGCGGCTGGTG
TACGAGGTGCGGCAAAAGTGCCGGAACATCGAGGACATCTGCATCTCGTGTGGGAGCCTCAATGTCACCCTGGAACACCC
CCTCTTCATTGGAGGAATGTGCCAAAATTGCAAGAACTGTTTCCTGGAATGCGCCTACCAGTACGACGATGATGGCTATC
AGTCATACTGCACCATCTGCTGCGGGGGGCGCGAGGTGCTCATGTGTGGGAACAACAACTGCTGCCGGTGCTTCTGTGTG
GAGTGTGTGGACCTCTTGGTGGGGCCGGGGGCTGCACAGGCGGCCATTAAGGAAGACCCCTGGAACTGCTACATGTGTGG
CCACAAGGGCACCTACGGGCTGCTGCGGCGTCGGGACGACTGGCCCTCTCGGCTCCAGATGTTCTTCGCCAATAACCACG
ACCAGGAATTCGACCCTCCGAAGGTTTACCCGCCTGTCCCAGCTGAAAAGAGGAAGCCCATCCGGGTGCTGTCTCTCTTT
GATGGAATTGCTACAGGGCTCCTGGTGCTGAAGGACTTGGGCATCCAGGTGGACCGCTACATCGCCTCAGAGGTGTGCGA
GGACTCCATCACGGTGGGCATGGTGCGGCACCAGGGGAAGATCATGTACGTGGGGGACGTCCGCAGCGTCACACAGAAGC
ACATCCAGGAATGGGGCCCATTTGACCTTGTGATCGGGGGCAGCCCCTGCAACGACCTCTCCATTGTCAACCCTGCCCGC
AAGGGGCTGTATGAGGGCACTGGCCGGCTCTTCTTTGAGTTCTACCGCCTCCTGCATGACGCGCGGCCCAAGGAGGGAGA
TGATCGCCCCTTCTTCTGGCTCTTTGAGAATGTGGTGGCCATGGGCGTTAGTGACAAGAGGGACATCTCACGATTTCTCG
AGTCCAACCCCGTCATGATTGATGCCAAAGAAGTGTCGGCCGCACACAGGGCCCGCTACTTCTGGGGTAACCTTCCCGGT
ATGAACAGGCCGTTGGCATCCACTGTGAATGATAAGCTGGAGCTGCAGGAGTGTCTGGAGCATGGCAGGATAGCCAAGTT
CAGCAAAGTGAGGACCATCACTACCAGGTCAAACTCCATAAAGCAGGGCAAAGACCAGCACTTCCCCGTCTTCATGAACG
AGAAGGAGGACATCCTGTGGTGCACTGAGATGGAAAGGGTGTTTGGCTTTCCTGTGCACTATACCGACGTCTCCAACATG
AGCCGCTTGGCGAGACAGAGGCTGCTGGGCCGGTCGTGGAGCGTGCCCGTGATCCGCCACCTCTTCGCTCCGCTGAAGGA
ATACTTTGCTTGTGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 9 .87 RPM |
| SRP017611_kidney | 16 .93 RPM |
| SRP017611_brain | 26 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000008172 | possible_ortholog | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000004108 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000015850 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_564 | 92.81 | 50.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000024688 retrocopies