Parental gene:

TOMM40, ENSOCUG00000023582

Aliases:None
Description:translocase of outer mitochondrial membrane 40 homolog (yeast) [Source:HGNC Symbol;Acc:18001]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL019011:2886..98450(+)


>ENSOCUG00000023582
CTCAGAGCCTCTCCACCATGCAGCGACCCCCCACCACCACCCGCAACGCAAACCCGAGCCGTGACTCCGCCCCCGCCAAC
CCCCCCCGGAGAATCGCGGGCGAGGGGCGGCGGCTCACTGGGGTCTGGGAGGATGGCGGGCCGAGGTTCGGAGCGGACCG
CAGGGGCCTCCGCCGCCGGCGTCGCGGACGATGGGGCCTGCGGCTGCCTGCCCAACCCCGGCACGTTTGAGGAGTGCCAC
CGGAAGTGCAAGGAGCTGTTTCCCATTCAGATGGAGGGGGTCAAGCTCACGGTCAACAAGGGGCTGAGCAACCACTTCCA
GGTCAACCACACGGTCGCTCTCAGCACGGTCGGGGAGTCCAACTACCACTTCGGGGTCACGTACGTGGGCACGAAGCAGC
TGAGCCCCACGGAGGCGTTCCCAGTGCTGGTAGGCGACATGGACAACAGCGGCAGCCTCAACGCTCAGGTCATCCACCAG
CTGGGCCCCGGCCTCAGGTCCAAGATGGCCATCCAGACGCAGCAGTCGAAGTTCGTGAACTGGCAGGTGGACGGGGAGTA
CCGGGGCTCTGACTTCACAGCCGCCGTGACGCTGGGCAACCCGGACGTCCTGGTGGGCTCAGGAATCCTCGTGGCCCACT
ACCTGCAGAGCATCACGCCCAGCCTGGCCCTGGGCGGGGAGCTGGTCTACCACCGGCGGCCCGGGGAGGGCACCGTCATG
TCTCTGGCCGGCAAATACGCACTGAACAACTGGTTGGCCACGGTGACGCTGGGCCAGGCCGGCATGCACGCCACGTACTA
CCACAAA

Library Parental gene expression (RPM)
SRP017611_liver 4 .55 RPM
SRP017611_kidney 18 .45 RPM
SRP017611_brain 23 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000130204 ortholog_one2one 5 retrogenes
retro_hsap_1300, retro_hsap_1386, retro_hsap_2321, retro_hsap_2537, retro_hsap_3159,
Gorilla gorilla ENSGGOG00000023033 ortholog_one2one 1 retrogene
retro_ggor_1356,
Microcebus murinus ENSMICG00000014041 ortholog_one2one 1 retrogene
retro_mmur_420,
Myotis lucifugus ENSMLUG00000028928 ortholog_one2one 1 retrogene
retro_mluc_697,
Macaca mulatta ENSMMUG00000014303 ortholog_one2one 1 retrogene
retro_mmul_1998,
Nomascus leucogenys ENSNLEG00000001726 ortholog_one2one 2 retrogenes
retro_nleu_2368, retro_nleu_2542,
Pongo abelii ENSPPYG00000025858 ortholog_one2many 1 retrogene
retro_pabe_174,
Pan troglodytes ENSPTRG00000011126 ortholog_one2many 1 retrogene
retro_ptro_39,
Ictidomys tridecemlineatus ENSSTOG00000009019 ortholog_one2many 1 retrogene
retro_itri_150,
Drosophila melanogaster FBgn0016041 ortholog_many2many 1 retrogene
retro_dmel_74,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1143 50.26 69.14
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Download FASTA sequences of all ENSOCUG00000023582 retrocopies