Parental gene:

ENSOCUG00000023198

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:46069636..46085440(+)


>ENSOCUG00000023198
ATGGGGAACGTTTTTGAGAAGCTGTTTAAAAGTCTCTTTGGAAAAAAAGAAATGCGGATTCTTATGGTGGGCTTGGATGC
AGCTGGGAAGACCACCATCTTGTATAAACTGAAGCTGGGTGAGATCGTGACAACCATCCCCACGATAGGTTTCAATGTGG
AGACGGTAGAATATAAAAACATCAGCTTCACAGTCTGGGATGTCGGTGGCCAAGACAAAATCAGACCTCTGTGGCGACAT
TATTTCCAGAACACCCAAGGTCTGATTTTTGTGGTTGACAGCAATGACAGAGAGCGAGTGAACGAGGCCCGGGAAGAGCT
GACAAGAATGTTAGCTGAAGACGAGCTCAGAGATGCAGTTCTGCTGGTGTTTGTGAATAAACAGGATCTTCCCAATGCTA
TGAATGCAGCGGAGATAACAGACAAGCTGGGCTTGCATTCCCTCCGCCAGAGAAGCTGGTACATCCAAGCTACTTGCGCC
ACCAGTGGCGATGGGCTTTATGAAGGCCTGGACTGGCTCTCCAACCAGCTCAAAAACCAGAAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 1 .08 RPM
SRP017611_kidney 5 .47 RPM
SRP017611_brain 11 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004184 ortholog_one2one 1 retrogene
retro_amel_1639,
Bos taurus ENSBTAG00000006785 ortholog_one2one 1 retrogene
retro_btau_26,
Ciona savignyi ENSCSAVG00000007011 possible_ortholog 1 retrogene
retro_csav_2,
Equus caballus ENSECAG00000009563 ortholog_one2one 1 retrogene
retro_ecab_106,
Latimeria chalumnae ENSLACG00000019009 possible_ortholog 1 retrogene
retro_lcha_10,
Mus musculus ENSMUSG00000062421 ortholog_one2one 1 retrogene
retro_mmus_2056,
Oryctolagus cuniculus ENSOCUG00000000824 within_species_paralog 4 retrogenes
retro_ocun_1007, retro_ocun_1502, retro_ocun_1868, retro_ocun_987,
Oryctolagus cuniculus ENSOCUG00000014090 other_paralog 2 retrogenes
retro_ocun_1942, retro_ocun_751,
Oryctolagus cuniculus ENSOCUG00000023009 other_paralog 1 retrogene
retro_ocun_1404,
Oryctolagus cuniculus ENSOCUG00000023645 within_species_paralog 2 retrogenes
retro_ocun_1137, retro_ocun_247,
Otolemur garnettii ENSOGAG00000002503 ortholog_one2many 1 retrogene
retro_ogar_263,
Ictidomys tridecemlineatus ENSSTOG00000019768 ortholog_one2one 1 retrogene
retro_itri_883,
Tetraodon nigroviridis ENSTNIG00000011685 possible_ortholog 1 retrogene
retro_tnig_19,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_132 68.79 95.58
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Download FASTA sequences of all ENSOCUG00000023198 retrocopies