Parental gene: | ENSOCUG00000013727 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 16:21025828..21046943(+) |
>ENSOCUG00000013727
ATGTGGGTCCCAGCGACGGGACTTCCTTTGCGGTTGGCGCCCTTAGCCCTGGCGGGCGCGGGTCGCTTTTGCATTTTGAG
GACCCGAGCGACGACGCGTGGAGACCCGCCTCGCCGTGGCTTGTCTGATTCATCCCCGCAGCTGTTGCCCTATCCTGACT
TCGGGGAATCGCCTCCCTGGGTATGCAAGCACCGCTTGGACCCTAAGCGTTACGTAAGCAGTCGGGGATTGGCTGAGACC
TTGGTGCAGATCCTGCGGGGGAGTCAAAAAGACCCTCGCTCTCTCTTCTTAGAGTGCAATCCAGGTCCTGGAGTGCTGAC
TCAGGCATTACTTGAAACTGGTGCCAAAGTGGTTGCCCTTGAAAGTGACAGAAATTTCATTCCTCGTTTGGAGTCCTTAG
GAAATAATCTGGATGGAAAACTAGAAGTGGTCTACTGTGACTTCTTTAAATTGGATCCTAGAAAGTGTGGACTAGTAAGA
CCACCCATTATGATTTCACATGTGCTTTTTCAGAATTTGGGAATAAAGGCACTTCCTTGGTCAGCAGGTATTCCCTTAAA
AATAATTGGAATCTTCCCAATTAAAAATGAAAGAAAGGCACTATGGAAACTTTTATATGACCTATATTCCTGCACTTCTA
TATATAGGCATGGACGAGTAGAACTAAATATGTTCATTAGTGAAAAAGAATACCAGAAACTAATGGCAAATCCAAAAAAT
CCGAACCTGTATCAAGTATTAAGTGTGCTCTGGCAAGTAGCTTGTGAGATTAAGGTGCTGCATGTGGAGCCTTGGTCATC
ATTTGATGTATATACCCAAAATGGGAAGCTGAAAAAGCCAAAGCATAAGGATTCGTTAGAACGAATGCAACAAAACTTGT
ATTTTATTCGAATGACTCCTCGTCGAAATTTATTCACAGAAAACTTAACTCCTATTAACTACGATGTATTTTTTCATATG
GTAAAGCACTGTTTTGGGAAGCGCAATGCAAGCCTAATAGAACATTTAAGGTCATTGAGTCCAGTTGATGCAATGGATAT
ATTGATGCAAACAAGAAAAAATGAAAAAGTGAAAATAACTGACATGTATCCTCAAGACTTTAAACGCCTTTTTGAAACTA
TAGAGTGTTCCAAAGATTATACCCATAAATGGCTATATGATGACAGCATGGAGAACACATATGCA
ATGTGGGTCCCAGCGACGGGACTTCCTTTGCGGTTGGCGCCCTTAGCCCTGGCGGGCGCGGGTCGCTTTTGCATTTTGAG
GACCCGAGCGACGACGCGTGGAGACCCGCCTCGCCGTGGCTTGTCTGATTCATCCCCGCAGCTGTTGCCCTATCCTGACT
TCGGGGAATCGCCTCCCTGGGTATGCAAGCACCGCTTGGACCCTAAGCGTTACGTAAGCAGTCGGGGATTGGCTGAGACC
TTGGTGCAGATCCTGCGGGGGAGTCAAAAAGACCCTCGCTCTCTCTTCTTAGAGTGCAATCCAGGTCCTGGAGTGCTGAC
TCAGGCATTACTTGAAACTGGTGCCAAAGTGGTTGCCCTTGAAAGTGACAGAAATTTCATTCCTCGTTTGGAGTCCTTAG
GAAATAATCTGGATGGAAAACTAGAAGTGGTCTACTGTGACTTCTTTAAATTGGATCCTAGAAAGTGTGGACTAGTAAGA
CCACCCATTATGATTTCACATGTGCTTTTTCAGAATTTGGGAATAAAGGCACTTCCTTGGTCAGCAGGTATTCCCTTAAA
AATAATTGGAATCTTCCCAATTAAAAATGAAAGAAAGGCACTATGGAAACTTTTATATGACCTATATTCCTGCACTTCTA
TATATAGGCATGGACGAGTAGAACTAAATATGTTCATTAGTGAAAAAGAATACCAGAAACTAATGGCAAATCCAAAAAAT
CCGAACCTGTATCAAGTATTAAGTGTGCTCTGGCAAGTAGCTTGTGAGATTAAGGTGCTGCATGTGGAGCCTTGGTCATC
ATTTGATGTATATACCCAAAATGGGAAGCTGAAAAAGCCAAAGCATAAGGATTCGTTAGAACGAATGCAACAAAACTTGT
ATTTTATTCGAATGACTCCTCGTCGAAATTTATTCACAGAAAACTTAACTCCTATTAACTACGATGTATTTTTTCATATG
GTAAAGCACTGTTTTGGGAAGCGCAATGCAAGCCTAATAGAACATTTAAGGTCATTGAGTCCAGTTGATGCAATGGATAT
ATTGATGCAAACAAGAAAAAATGAAAAAGTGAAAATAACTGACATGTATCCTCAAGACTTTAAACGCCTTTTTGAAACTA
TAGAGTGTTCCAAAGATTATACCCATAAATGGCTATATGATGACAGCATGGAGAACACATATGCA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .93 RPM |
| SRP017611_kidney | 9 .83 RPM |
| SRP017611_brain | 5 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000013225 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000162851 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001095 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003923 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022915 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004146 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007823 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000000046 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002188 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_236 | 98.61 | 90.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1557 | 95.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000013727 retrocopies