Parental gene:

RNF128, ENSOCUG00000012328

Aliases:None
Description:ring finger protein 128, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:21153]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:X:55307066..55369766(+)


>ENSOCUG00000012328
ATGGGGCCGCCGTCCGGAGCCGGGGTCTCCTGCCGCGGGGGCTGCGGCTCTTCCCGATTCCTGGCGTGGTGCTTCTTGCT
GGCACTGAGCCCGCATGCCCCCGGCTCCCGAGGGGCCGAAGCAGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTC
CGCAACCCGGAGTGAACCGCACGGTGTGGGAGCTGAGCGAGGAGGGCGTGTATGGCCAGGACTCGCCACTGGAGCCCGTG
GCTGGGGTCCTCGTGCCTCCCGACGGGCCCGGGGCTCTCAACGCCTGTAACCCGCACACGAATTTCACGGTACCCACGGT
TTGGGGAAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTTCGCAGACAAAATCCATC
TGGCTTACGAGAGAGGGGCGTCCGGAGCCGTCATCTTTAACTTCCCGGGGACCCGCAATGAGGTCATCCCCATGTCTCAC
CCGGGTGCCGGTGACATTGTTGCAATCATGATTGGTAATCTGAAAGGCACAAAAATTCTACAATGGATCCAAAGTGGCAT
ACAAGTAACAATGGTCATTGAAGTAGGAAAAAAACATGGCCCTTGGGTGAATCATTATTCAATTTTCTTCGTTTCTGTAT
CCTTTTTTATTATTACGGCAGCCACTGTGGGCTATTTTATCTTTTATTCTGCCCGAAGATTGCGGAATGCAAGAGCTCAA
AGCAGGAAGCAGAGACAATTAAAGGCTGATGCTAAAAAGGCCATTGGAAGGCTGCAACTACGTACACTGAAACAAGGAGA
CAAGGAAATCGGCCCTGATGGAGATAGTTGTGCTGTGTGTATTGAGCTATATAAACCAAATGATTTGGTGCGCATCTTAA
CCTGCAACCATATTTTCCATAAGACATGTGTTGACCCATGGCTGTTAGAACACAGGACTTGTCCTATGTGCAAATGTGAC
ATACTGAAAGCTTTGGGAATTGAGGTGGACGTTGAAGATGGATCAGTGTCTTTGCAAGTCCCTGTATCCAATGAAACATC
CCATAGTGCCTCCCCGCATGAAGAGGATAACCGCAGTGAGACTGCATCATCTGGATACGCTTCAGTACAGGGAGCCGATG
AACCACCTCTGGAAGAGCACGTGCAGTCTGCAAATGAAAACCTACAGCTGGTAAACCATGAAGCAAATTCGGTGGCAGTG
GATGTCGTTCCTCATGTTGACAACCCAACCTTTGAAGAAGATGAAACTCCTGATCATGAGACTGCTGTTCGAGAAATTAA
ATCATAA

Library Parental gene expression (RPM)
SRP017611_liver 47 .09 RPM
SRP017611_kidney 62 .54 RPM
SRP017611_brain 15 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000022920 ortholog_one2one 1 retrogene
retro_btau_1358,
Loxodonta africana ENSLAFG00000002816 ortholog_one2one 1 retrogene
retro_lafr_946,
Macropus eugenii ENSMEUG00000001567 ortholog_one2one 1 retrogene
retro_meug_1139,
Mustela putorius furo ENSMPUG00000003695 ortholog_one2one 1 retrogene
retro_mputfur_340,
Pelodiscus sinensis ENSPSIG00000010727 possible_ortholog 1 retrogene
retro_psin_49,
Pan troglodytes ENSPTRG00000022151 ortholog_one2one 1 retrogene
retro_ptro_2651,
Sus scrofa ENSSSCG00000012551 ortholog_one2one 1 retrogene
retro_sscr_597,
Ictidomys tridecemlineatus ENSSTOG00000022922 ortholog_one2one 2 retrogenes
retro_itri_1254, retro_itri_1255,
Tursiops truncatus ENSTTRG00000007536 ortholog_one2one 1 retrogene
retro_ttru_6,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_37 56.91 57.48
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Download FASTA sequences of all ENSOCUG00000012328 retrocopies