Parental gene: | CCNJ, ENSOCUG00000011114 |
| Aliases: | None |
| Description: | cyclin J [Source:HGNC Symbol;Acc:23434] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 18:44726751..44749356(+) |
>ENSOCUG00000011114
ATGGAGCTGGAGGGGCAGTGGTGGCGAGGACAGCTGGCTGCGGATATTCACCAAGCGCTTCGGTACAAGGAGCTCAAGTT
GCCCTCCTACAAGGGCCAGTCCCCTCAACTGAGTCTCAGACGGTATTTTGCTGACTTGATTGCCATTGTAAGCAATCGCT
TCACACTGTGCCCTTCTGCCCGACACCTTGCTGTCTATTTGTTGGACCTGTTTATGGATCGCTATGACATCTCTATCCAG
CAGCTACATCTAGTTGCTCTTTCCTGTCTACTTCTAGCAAGTAAATTTGAAGAAAAAGAAGATAGTGTGCCTAAGCTAGA
ACAGCTCAACAGCCTGGGTTGTATGACTAACATGAATCTAGTGTTAACAAAACAAAATCTGCTACATATGGAACTATTAC
TATTAGAAACCTTTCAGTGGAACCTCTGCCTTCCAACAGCTGCTCATTTCATCGAGTATTATCTTTCCGAAGCAGTACAC
GAAACAGATCTTCATGATGGCTGGCCAATGATTTGCTTGGAAAAAACTAAACTTTACATGGCCAAATATGCAGATTACTT
CCTAGAAGTATCTTTGCAAGATTATGCCTTTCTAAATTATGCACCTTCTTTAGTAGCTGCTGCGTGTGTGGCTTCTTCAA
GGATCATACTTCGTCTTTCTCCAACATGGCCTACACGACTGCATCGTCTTACTGCTTACTCCTGGGATTTCTTAGTGCAG
TGTATTGAGCGGCTGTTGATTGCTCACGATAATGATGTGAAAGAAGCAAACAAACAGAGAGGACAGGCAGGACCTCAGTC
AGCACAGCTAAGTGTGTTCCAAACAGCCTCCCAGCCCACACGGCCAGGTCACTTTCAGCAACCCCAGTATCTCCATCAGA
CACATCAGACCTCTCTGCAGTATCGCCATCCTGTATCAGAACAACCAAGCTGTCAGCAGATTGTGTCTACCACACACACC
TCATCTTACACACTACAGACGTGTCCTGCTGGCTTCCAAACTAGTGTTCATGGCCTTGGGCATGTGCAGACTGGTGTTGG
GATGTCACTGGCAATACCAGTAGAAGTTAAGCCTTGTCTGACTGTTTCTTATAACCGGAGTTATCAGATAAATGAACATT
ACCCTTGTATTACTCCATGCTTTGAGAGGTGA
ATGGAGCTGGAGGGGCAGTGGTGGCGAGGACAGCTGGCTGCGGATATTCACCAAGCGCTTCGGTACAAGGAGCTCAAGTT
GCCCTCCTACAAGGGCCAGTCCCCTCAACTGAGTCTCAGACGGTATTTTGCTGACTTGATTGCCATTGTAAGCAATCGCT
TCACACTGTGCCCTTCTGCCCGACACCTTGCTGTCTATTTGTTGGACCTGTTTATGGATCGCTATGACATCTCTATCCAG
CAGCTACATCTAGTTGCTCTTTCCTGTCTACTTCTAGCAAGTAAATTTGAAGAAAAAGAAGATAGTGTGCCTAAGCTAGA
ACAGCTCAACAGCCTGGGTTGTATGACTAACATGAATCTAGTGTTAACAAAACAAAATCTGCTACATATGGAACTATTAC
TATTAGAAACCTTTCAGTGGAACCTCTGCCTTCCAACAGCTGCTCATTTCATCGAGTATTATCTTTCCGAAGCAGTACAC
GAAACAGATCTTCATGATGGCTGGCCAATGATTTGCTTGGAAAAAACTAAACTTTACATGGCCAAATATGCAGATTACTT
CCTAGAAGTATCTTTGCAAGATTATGCCTTTCTAAATTATGCACCTTCTTTAGTAGCTGCTGCGTGTGTGGCTTCTTCAA
GGATCATACTTCGTCTTTCTCCAACATGGCCTACACGACTGCATCGTCTTACTGCTTACTCCTGGGATTTCTTAGTGCAG
TGTATTGAGCGGCTGTTGATTGCTCACGATAATGATGTGAAAGAAGCAAACAAACAGAGAGGACAGGCAGGACCTCAGTC
AGCACAGCTAAGTGTGTTCCAAACAGCCTCCCAGCCCACACGGCCAGGTCACTTTCAGCAACCCCAGTATCTCCATCAGA
CACATCAGACCTCTCTGCAGTATCGCCATCCTGTATCAGAACAACCAAGCTGTCAGCAGATTGTGTCTACCACACACACC
TCATCTTACACACTACAGACGTGTCCTGCTGGCTTCCAAACTAGTGTTCATGGCCTTGGGCATGTGCAGACTGGTGTTGG
GATGTCACTGGCAATACCAGTAGAAGTTAAGCCTTGTCTGACTGTTTCTTATAACCGGAGTTATCAGATAAATGAACATT
ACCCTTGTATTACTCCATGCTTTGAGAGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 4 .55 RPM |
| SRP017611_kidney | 5 .78 RPM |
| SRP017611_brain | 8 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016259 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000002270 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000107443 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006034 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009466 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_425 | 72.82 | 52.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000011114 retrocopies