Parental gene: | RPN1, ENSOCUG00000011098 |
| Aliases: | None |
| Description: | ribophorin I [Source:HGNC Symbol;Acc:10381] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 9:7518995..7542337(-) |
>ENSOCUG00000011098
ATGGAGGCGCCCGTCGCCTGCTTGTTTCTGTTCCTGGTGCTCGGGGCCTGGGCCCCGGCGCCCGGCAGCGCCTCTTCGGA
GCCACCGCCATTAGTCAACGAAGACGTGAAGCGCACGGTGGACCTGAGCAGCCACCTGGCCAAGGTGACCGCGGAGATCG
TCCTGGCGCACCCGGGCGGCGGCTCCTCGTCCCGAGCCACCTCCTTCCTCCTGGCCCTGGAGCCCGAGCTCGAGGCCCGG
TTGGCGCACCTCGGCGTGCAGGTGAAGGGAGAAGATGAGGAAGAGAACAATCTGGAAGTGCGAGAAACCAAAATTAAGGG
TAGAAGTGGGAGATTCTTCACGGTCAAGCTCCCAGTTGCCCTTGATCCTGGGACCAAGCTTTCAGTTATTGTGGAAACTG
TCTACACCCATGTGCTTCAGCCATATCCAACTCAGATCACCCAATCAGAGAAACAGTTTGTGGTGTTTGAGGGAAACCAT
TATTTCTACTCTCCCTACCCAACGAAGACACAAACCATGCGTGTGAAGCTTGCCTCCCGAAATGTGGAAAGCTACACCAA
GCTGGGAAACCCTACGCGCTCCGAGGACCTCCTGGATTATGGGCCGTTCAGAGATGTCCCTGCCTATAGTCAGGATGCTT
TTAAAGTACACTATGAGAACAACAGCCCTTTCCTGACCATCACCAGCATGACCCGCGTCATCGAGGTCTCTCACTGGGGG
AATATCGCTGTGGAGGAAAACGTGGACCTGAAGCACACAGGGGCTGTGCTGAAGGGGCCCTTCTCGCGCTACGACTACCA
GAGACAGCCCGACAGTGGGATCTCCTCCATCCGCTCCTTCAAGACCATCCTCCCTGCGGCTGCCCAGGATGTTTACTACC
GGGATGAGATCGGCAACGTGTCCACCAGCCACCTCCTCATTTTGGATGACTCCGTAGAGATGGAAATCCGGCCTCGCTTC
CCTCTCTTTGGAGGGTGGAAGACACATTACATCGTTGGCTACAACCTCCCAAGCTATGAATACCTCTATAATTTGGGTGA
TCAGTATGCACTGAAGATGAGATTTGTGGACCATGTGTTTGATGAGCAGGTGATAGATTCTCTGACTGTGAAGATCATTC
TGCCTGAAGGAGCCAAGAATATCCAAGTTGATAGTCCTTATGAAATCAGCCGTGCCCCAGACGAGCTGCACTACACTTAC
CTGGACACATTTGGCCGCCCTGTGATTGTTGCTTACAAGAAAAATCTGGTAGAACAGCACATTCAGGACATTGTGGTCCA
CTACACGTTCAACAAGGTGCTCATGCTGCAGGAGCCCCTGCTGGTGGTAGCTGCCTTCTACATCCTGTTCTTCACCGTCA
TCATCTATGTCCGTCTGGACTTTTCCATCACCAAGGATCCGGCTGCGGAAGCCAGAATGAAAGTGGCTTGCATCACAGAG
CAGGTCTTGACCCTGGTCAACAAGAGAATAGGCCTCTACCGTCACTTTGACGAGACCATTAATAGGTACAAGCAATCTCG
GGATGTCTCCACTCTGAACAGCGGCAAGAAGAGCCTGGAGACTGAACACAAGGCCTTGACCAGTGAGATTGCTCTGCTGC
AGTCCAGGCTGAAGACAGAGGGCTCTGATCTGTGCGACAGAGTGAGTGAAATGCAGAAGCTGGACGTGCAGGTCAAGGAG
CTGGTGTTGAAGTCGGCGGTGGAGGCCGAGCGGTTGGTGGCCGGCAAGCTCAAGAAGGACACGTACATCGAGAATGAGAA
GCTCATCTCTGGAAAGCGCCAGGAGCTGGTCACCAAGATCGACCACATCTTGGATGCTCTGTAG
ATGGAGGCGCCCGTCGCCTGCTTGTTTCTGTTCCTGGTGCTCGGGGCCTGGGCCCCGGCGCCCGGCAGCGCCTCTTCGGA
GCCACCGCCATTAGTCAACGAAGACGTGAAGCGCACGGTGGACCTGAGCAGCCACCTGGCCAAGGTGACCGCGGAGATCG
TCCTGGCGCACCCGGGCGGCGGCTCCTCGTCCCGAGCCACCTCCTTCCTCCTGGCCCTGGAGCCCGAGCTCGAGGCCCGG
TTGGCGCACCTCGGCGTGCAGGTGAAGGGAGAAGATGAGGAAGAGAACAATCTGGAAGTGCGAGAAACCAAAATTAAGGG
TAGAAGTGGGAGATTCTTCACGGTCAAGCTCCCAGTTGCCCTTGATCCTGGGACCAAGCTTTCAGTTATTGTGGAAACTG
TCTACACCCATGTGCTTCAGCCATATCCAACTCAGATCACCCAATCAGAGAAACAGTTTGTGGTGTTTGAGGGAAACCAT
TATTTCTACTCTCCCTACCCAACGAAGACACAAACCATGCGTGTGAAGCTTGCCTCCCGAAATGTGGAAAGCTACACCAA
GCTGGGAAACCCTACGCGCTCCGAGGACCTCCTGGATTATGGGCCGTTCAGAGATGTCCCTGCCTATAGTCAGGATGCTT
TTAAAGTACACTATGAGAACAACAGCCCTTTCCTGACCATCACCAGCATGACCCGCGTCATCGAGGTCTCTCACTGGGGG
AATATCGCTGTGGAGGAAAACGTGGACCTGAAGCACACAGGGGCTGTGCTGAAGGGGCCCTTCTCGCGCTACGACTACCA
GAGACAGCCCGACAGTGGGATCTCCTCCATCCGCTCCTTCAAGACCATCCTCCCTGCGGCTGCCCAGGATGTTTACTACC
GGGATGAGATCGGCAACGTGTCCACCAGCCACCTCCTCATTTTGGATGACTCCGTAGAGATGGAAATCCGGCCTCGCTTC
CCTCTCTTTGGAGGGTGGAAGACACATTACATCGTTGGCTACAACCTCCCAAGCTATGAATACCTCTATAATTTGGGTGA
TCAGTATGCACTGAAGATGAGATTTGTGGACCATGTGTTTGATGAGCAGGTGATAGATTCTCTGACTGTGAAGATCATTC
TGCCTGAAGGAGCCAAGAATATCCAAGTTGATAGTCCTTATGAAATCAGCCGTGCCCCAGACGAGCTGCACTACACTTAC
CTGGACACATTTGGCCGCCCTGTGATTGTTGCTTACAAGAAAAATCTGGTAGAACAGCACATTCAGGACATTGTGGTCCA
CTACACGTTCAACAAGGTGCTCATGCTGCAGGAGCCCCTGCTGGTGGTAGCTGCCTTCTACATCCTGTTCTTCACCGTCA
TCATCTATGTCCGTCTGGACTTTTCCATCACCAAGGATCCGGCTGCGGAAGCCAGAATGAAAGTGGCTTGCATCACAGAG
CAGGTCTTGACCCTGGTCAACAAGAGAATAGGCCTCTACCGTCACTTTGACGAGACCATTAATAGGTACAAGCAATCTCG
GGATGTCTCCACTCTGAACAGCGGCAAGAAGAGCCTGGAGACTGAACACAAGGCCTTGACCAGTGAGATTGCTCTGCTGC
AGTCCAGGCTGAAGACAGAGGGCTCTGATCTGTGCGACAGAGTGAGTGAAATGCAGAAGCTGGACGTGCAGGTCAAGGAG
CTGGTGTTGAAGTCGGCGGTGGAGGCCGAGCGGTTGGTGGCCGGCAAGCTCAAGAAGGACACGTACATCGAGAATGAGAA
GCTCATCTCTGGAAAGCGCCAGGAGCTGGTCACCAAGATCGACCACATCTTGGATGCTCTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 96 .65 RPM |
| SRP017611_kidney | 193 .49 RPM |
| SRP017611_brain | 104 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005191 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017529 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017213 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_899 | 96.75 | 65.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000011098 retrocopies