Parental gene:

MAD2L1, ENSOCUG00000008243

Aliases:None
Description:MAD2 mitotic arrest deficient-like 1 (yeast) [Source:HGNC Symbol;Acc:6763]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:15:95191374..95198571(-)


>ENSOCUG00000008243
ATGGCGCGACAGCTAGCCCGGGAGCAGGGTATCACCCTGCGCGGGAGCGCTGAAATTGTGGCCGAGTTCTTCTCATTTGG
CATCAACAGCATTTTGTATCAGCGTGGCATATATCCATCTGAAACCTTTACTCGAGTGCAGAAGTATGGACTCACCTTGC
TTGTAACTACTGATCCTGAGCTTATCAAATACCTAAATAATGTGGTGGAACAACTAAAAGATTGGTTATACAAATGTTCA
GTTCAGAAACTGGTAGTAGTCATCTCAAATATTGAAAGTGGTGAGGTCCTTGAAAGGTGGCAGTTTGATATTGAATGTGA
CAAGACTGCAAAAGATGACAGTGCTCCCAGAGAAAAGTCTCAGAAAGTTATCCAGGATGAAATCCGTTCGGTGATCAGAC
AAATCACAGCTACAGTGACATTTCTGCCACTATTGGAAGTTTCATGTTCATTTGATCTACTGATTTATACAGACAAAGAT
TTGGTTGTTCCTGAAAAATGGGAAGAATCTGGACCACAGTTTATTACCAATTCTGAGGAAGTCCGTCTCCGTTCATTTAC
TACAACTATCCACAAAGTAAATAGTATGGTGGCCTACAAAATTCCTGTCAATGACTGA

Library Parental gene expression (RPM)
SRP017611_liver 0 .77 RPM
SRP017611_kidney 2 .84 RPM
SRP017611_brain 4 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012813 possible_ortholog 2 retrogenes
retro_chof_1340, retro_chof_2524,
Dasypus novemcinctus ENSDNOG00000013456 possible_ortholog 1 retrogene
retro_dnov_1348,
Erinaceus europaeus ENSEEUG00000009629 possible_ortholog 1 retrogene
retro_eeur_446,
Echinops telfairi ENSETEG00000015756 possible_ortholog 1 retrogene
retro_etel_724,
Gorilla gorilla ENSGGOG00000002516 possible_ortholog 1 retrogene
retro_ggor_1281,
Loxodonta africana ENSLAFG00000029619 possible_ortholog 1 retrogene
retro_lafr_1138,
Myotis lucifugus ENSMLUG00000011092 possible_ortholog 8 retrogenes
retro_mluc_1242, retro_mluc_165, retro_mluc_1802, retro_mluc_1904, retro_mluc_1986, retro_mluc_2434, retro_mluc_609, retro_mluc_696,
Macaca mulatta ENSMMUG00000004875 possible_ortholog 2 retrogenes
retro_mmul_1292, retro_mmul_1701,
Mus musculus ENSMUSG00000029910 ortholog_one2one 2 retrogenes
retro_mmus_1684, retro_mmus_2573,
Otolemur garnettii ENSOGAG00000004054 possible_ortholog 1 retrogene
retro_ogar_199,
Ictidomys tridecemlineatus ENSSTOG00000025410 ortholog_one2many 2 retrogenes
retro_itri_1592, retro_itri_327,
Tupaia belangeri ENSTBEG00000011065 possible_ortholog 3 retrogenes
retro_tbel_4460, retro_tbel_4666, retro_tbel_664,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_752 80.19 51.22
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2. retro_ocun_1424 68.24 71.22
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3. retro_ocun_1469 66.85 86.83
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4. retro_ocun_1486 78.29 62.93
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Download FASTA sequences of all ENSOCUG00000008243 retrocopies