Parental gene: | PRKRA, ENSOCUG00000005489 |
| Aliases: | None |
| Description: | protein kinase, interferon-inducible double stranded RNA dependent activator [Source:HGNC Symbol;Acc:9438] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 7:118109780..118128209(-) |
>ENSOCUG00000005489
ATGTCCCAAAGCAGGCATCGCGCCGAGGCCCCGCCGCTGGAGCCCGAGGACAGCGGCACATTCAGGTTTGGGGAAATGAT
AACAGCTAAGCCAGGGAAAACGCCGATCCAGGTATTACACGAATACGGCATGAAGACCAAGAACATCCCGGTTTATGAAT
GCGAACGATCCGATGTGCAAATACGCGTGCCCACTTTCACCTTCAGAGTAACCGTGGGTGACATAACCTGCACAGGTGAA
GGTACAAGTAAGAAGCTGGCAAAACATAGAGCTGCAGAAGCTGCCATAAACATTTTGAAAGCCAATGCAAGTATTTGCTT
TGCAGTTCCTGATCCTTTAATGCCTGACCCTTCCAAGCAACCAAAGAACCAGCTTAATCCTATTGGCTCATTACAGGAAT
TGGCCATTCATCATGGTTGGAGACTTCCCGAATACACCCTTTCCCAGGAGGGAGGACCTGCCCATAAGAGGGAGTACACC
ACAATTTGCAGGCTAGAGTCATTTATGGAAACTGGAAAGGGGGCATCAAAAAAACAAGCCAAGAGAAATGCTGCCGAGAA
ATTTCTTGCCAAATTTAGTAATATTTCTCCAGAGAACCACATTTCTTTAACCAATGTAGTAGGACATTCTTTAGGATGTA
CTTGGCACTCCTTGAGGAATTCCCCTGGTGAAAAGATCAACTTACTGAAGAGAAGTCTCCTGAGTCTCCCAAATACAGAT
TATATCCAGCTGCTCAGTGACATTGCCAAAGAACAAGGTTTTAATATCACATATTTGGACATAGAAGAACTGAGTGCCAA
TGGACACTACCAATGTCTGGCTGAACTGTCTACCAGTCCCATCACAGTCTGCCATGGCTCGGGCATCTCCTGTGGCAATG
CACAAAGTGATGCAGCTCACAACGCTTTGCAGTATCTAAAGATAATAGCAGAAAGAAAGTAA
ATGTCCCAAAGCAGGCATCGCGCCGAGGCCCCGCCGCTGGAGCCCGAGGACAGCGGCACATTCAGGTTTGGGGAAATGAT
AACAGCTAAGCCAGGGAAAACGCCGATCCAGGTATTACACGAATACGGCATGAAGACCAAGAACATCCCGGTTTATGAAT
GCGAACGATCCGATGTGCAAATACGCGTGCCCACTTTCACCTTCAGAGTAACCGTGGGTGACATAACCTGCACAGGTGAA
GGTACAAGTAAGAAGCTGGCAAAACATAGAGCTGCAGAAGCTGCCATAAACATTTTGAAAGCCAATGCAAGTATTTGCTT
TGCAGTTCCTGATCCTTTAATGCCTGACCCTTCCAAGCAACCAAAGAACCAGCTTAATCCTATTGGCTCATTACAGGAAT
TGGCCATTCATCATGGTTGGAGACTTCCCGAATACACCCTTTCCCAGGAGGGAGGACCTGCCCATAAGAGGGAGTACACC
ACAATTTGCAGGCTAGAGTCATTTATGGAAACTGGAAAGGGGGCATCAAAAAAACAAGCCAAGAGAAATGCTGCCGAGAA
ATTTCTTGCCAAATTTAGTAATATTTCTCCAGAGAACCACATTTCTTTAACCAATGTAGTAGGACATTCTTTAGGATGTA
CTTGGCACTCCTTGAGGAATTCCCCTGGTGAAAAGATCAACTTACTGAAGAGAAGTCTCCTGAGTCTCCCAAATACAGAT
TATATCCAGCTGCTCAGTGACATTGCCAAAGAACAAGGTTTTAATATCACATATTTGGACATAGAAGAACTGAGTGCCAA
TGGACACTACCAATGTCTGGCTGAACTGTCTACCAGTCCCATCACAGTCTGCCATGGCTCGGGCATCTCCTGTGGCAATG
CACAAAGTGATGCAGCTCACAACGCTTTGCAGTATCTAAAGATAATAGCAGAAAGAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .08 RPM |
| SRP017611_kidney | 21 .69 RPM |
| SRP017611_brain | 30 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| ENSG00000180228 | ortholog_one2one | 0 retrogenes |
|
|
| Macaca mulatta | ENSMMUG00000002185 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000003080 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009700 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1117 | 70.31 | 60.38 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000005489 retrocopies