Parental gene: | EIF3J, ENSOCUG00000005376 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 3, subunit J [Source:HGNC Symbol;Acc:3270] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 17:27722517..27746822(-) |
>ENSOCUG00000005376
CTCACACACGCTCACACCCGGCTCGAGGGCGACTCGGACTCCTGGGACGCGGACACGTTCTCCGTGGAAGACCCGGTGCG
GAAGGTGGGGGGCGGCGGCACCGCTGGTGGGGACCGCTGGGAAGGCGAGGACGAGGATGAAGACGTCAAGGATAACTGGG
ATGATGATGACGACGAAAAGAAAGAGGAAGCAGAAGTAAAACCAGATATCAGTGTAACTGTGAATAAAACATTTCTTTCA
GAAATAAAAATTCAGGAACGGCAACAAAAGAAAAGGCAAGAAGAAATTAAGAAGAGGTTAGAAGAACCAGAAGAACCCAA
AGTGCTAACACCAGAAGAACAATTAGCAGATAAACTGCGGCTAAAGAAATTACAGGAAGAGTCAGACCTTGAATTAGCAA
AAGAAACTTTTGGTGTTAATAATACAGTTTATGGAATAGATGCTATGAATCCATCTTCAAGAGAAGATTTCACAGAGTTT
GGAAAGTTACTAAAAGATAAAATTACACAGTATGAAAAGTCACTATATTATGCCAGTTTTTTGGAAGCCTTAGTTCGAGA
TGTGTGTATTTCATTGGAAATCGATGACTTGAAAAAGATTACCAATTCATTGACTGTGCTTTGCAGTGAAAAACAAAAGC
AAGAAAAGCAAAGCAAAGCCAAAAAGAAGAAGAAAGGTGTGGTTCCTGGAGGGGGATTAAAAGCCACCATGAAAGACGAT
CTGGCAGATTACGGGGGCTATGATGGAGGATATGCACAAGACTATGAAGACTTCATGTGA
CTCACACACGCTCACACCCGGCTCGAGGGCGACTCGGACTCCTGGGACGCGGACACGTTCTCCGTGGAAGACCCGGTGCG
GAAGGTGGGGGGCGGCGGCACCGCTGGTGGGGACCGCTGGGAAGGCGAGGACGAGGATGAAGACGTCAAGGATAACTGGG
ATGATGATGACGACGAAAAGAAAGAGGAAGCAGAAGTAAAACCAGATATCAGTGTAACTGTGAATAAAACATTTCTTTCA
GAAATAAAAATTCAGGAACGGCAACAAAAGAAAAGGCAAGAAGAAATTAAGAAGAGGTTAGAAGAACCAGAAGAACCCAA
AGTGCTAACACCAGAAGAACAATTAGCAGATAAACTGCGGCTAAAGAAATTACAGGAAGAGTCAGACCTTGAATTAGCAA
AAGAAACTTTTGGTGTTAATAATACAGTTTATGGAATAGATGCTATGAATCCATCTTCAAGAGAAGATTTCACAGAGTTT
GGAAAGTTACTAAAAGATAAAATTACACAGTATGAAAAGTCACTATATTATGCCAGTTTTTTGGAAGCCTTAGTTCGAGA
TGTGTGTATTTCATTGGAAATCGATGACTTGAAAAAGATTACCAATTCATTGACTGTGCTTTGCAGTGAAAAACAAAAGC
AAGAAAAGCAAAGCAAAGCCAAAAAGAAGAAGAAAGGTGTGGTTCCTGGAGGGGGATTAAAAGCCACCATGAAAGACGAT
CTGGCAGATTACGGGGGCTATGATGGAGGATATGCACAAGACTATGAAGACTTCATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 16 .03 RPM |
| SRP017611_kidney | 28 .48 RPM |
| SRP017611_brain | 25 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002412 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000012396 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000000548 | possible_ortholog | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000010372 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017696 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000027236 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005568 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1350 | 52.35 | 55.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000005376 retrocopies