Parental gene:

PITPNB, ENSOCUG00000000511

Aliases:None
Description:phosphatidylinositol transfer protein, beta [Source:HGNC Symbol;Acc:9002]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018723:1119264..1178100(-)


>ENSOCUG00000000511
CAAATGATCATTGAGATCAGCCGTGTGGTCTTACCATGTTCAGTCCAGGAGTATCAGGTTGGACAGCTTTACTCTGTTGC
AGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCCTATGAGAAAGATGGAGAAA
AGGGACAATACACACATAAAATTTACCACCTGAAGAGCAAAGTTCCTGCCTTCGTGAGGATGATTGCTCCCGAGGGTTCC
TTGGTGTTTCACGAAAAAGCCTGGAACGCCTACCCCTACTGTAGAACAATTGTAACGAATGAATATATGAAAGATGATTT
CTTCATTAAAATTGAAACCTGGCACAAACCAGACTTGGGAACATTAGAAAATGTACATGGTTTAGATCCAAACACGTGGA
AAACAGTTGAAATTGTCCACATAGATATTGCAGATCGAAGTCAAGTTGAACCAGCAGACTACAAAGCTGATGAAGATCCA
GCATTATTCCAGTCAGTCAAGACCAAGAGAGGCCCTTTGGGACCCAACTGGAAGAAGGAGCTGGCAAACAAGCCTGACTG
TCCTCAGATGTGTGCCTATAAGCTGGTGACCATCAAGTTCAAGTGGTGGGGGCTGCAAAGCAAAGTAGAGAACTTCATTC
AGAAGCAAGAAAAAAGGATATTTACAAACTTTCATCGCCAGCTTTTTTGTTGGATTGACAAGTGGATTGATCTGACAATG
GAAGACATTAGGAGAATGGAAGATGAAACTCAAAAAGAACTAGAAACAATGCGTAAGAAGGGCTCCGTCCGAGGCACGTC
GGCTGCTGATGTCTAG

Library Parental gene expression (RPM)
SRP017611_liver 90 .56 RPM
SRP017611_kidney 59 .90 RPM
SRP017611_brain 94 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012309 ortholog_one2one 2 retrogenes
retro_chof_2374, retro_chof_860,
Cavia porcellus ENSCPOG00000012298 ortholog_one2one 1 retrogene
retro_cpor_957,
Macropus eugenii ENSMEUG00000010442 ortholog_one2one 3 retrogenes
retro_meug_392, retro_meug_689, retro_meug_786,
Otolemur garnettii ENSOGAG00000000391 ortholog_one2one 1 retrogene
retro_ogar_1300,
Ochotona princeps ENSOPRG00000002540 ortholog_one2one 1 retrogene
retro_opri_931,
Tupaia belangeri ENSTBEG00000000293 ortholog_one2one 1 retrogene
retro_tbel_4285,
Takifugu rubripes ENSTRUG00000018546 ortholog_one2many 1 retrogene
retro_trub_36,
Tarsius syrichta ENSTSYG00000001148 ortholog_one2one 1 retrogene
retro_tsyr_503,
Tursiops truncatus ENSTTRG00000001278 ortholog_one2one 2 retrogenes
retro_ttru_1060, retro_ttru_1439,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1620 91.14 99.63
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Download FASTA sequences of all ENSOCUG00000000511 retrocopies