Parental gene: | ENSOANG00000007394 |
| Aliases: | None |
| Description: | None |
| Organism: | Platypus (Ornithorhynchus anatinus) |
| Coordinates: | 3:10281556..10322300(-) |
>ENSOANG00000007394
ATGTGTGCCTGTCCCGGCTCGGCGGAGGACCGCTGCTGCCCCCGGGTAGCATCGGTGCAGGATAAAGAGCATCCAAGAAA
TCTGATTCCAGAGCTCTGCAAGCAGTTTTATCATTTGGGCTGGGTCACTGGGACTGGAGGAGGAATTAGCCTGAAGTATG
GCAATGAAATCTACATTGCTCCATCAGGAGTACAAAAAGAACGAATTCAGCCGGAAGATATGTTTGTTTGCGACATAAAT
GAGCAGGATATCAGTGGACCTCCATCATACAAGAATCTAAAGAAGAGTCAATGTACTCCTCTCTTTATGAATGCTTATAC
CATAAGAGGAGCTGGAGCAGTGATCCACAGTCATTCGAAGGCTGCCGTCATGGCTACCCTTATCTTTCCAGGACATGAGT
TTAAAATTACGCATCAAGAGATGATAAAAGGAATCAGAAAATGTACCTCAGGAGGGTGTTATAGATACTATGATACACTA
GTGGTCCCCATTGTTGAGAACACACCTGAAGAGAAGGATCTTAAAGAACGAATGGCTCAAGCAATGAATCAATACCCGGA
TTCCTGTGCTGTATTAGTGAGGCGTCACGGAGTATATGTATGGGGAGAGACTTGGGAAAGGGCCAAAACCATGTGTGAGT
GCTATGACTACTTGTTTGATATTGCGGTACAGATGAAGATGATAGGATTGGACCCTTCAGAGCGTCCAGCTGGCGAAAAT
GGAATTGTATAA
ATGTGTGCCTGTCCCGGCTCGGCGGAGGACCGCTGCTGCCCCCGGGTAGCATCGGTGCAGGATAAAGAGCATCCAAGAAA
TCTGATTCCAGAGCTCTGCAAGCAGTTTTATCATTTGGGCTGGGTCACTGGGACTGGAGGAGGAATTAGCCTGAAGTATG
GCAATGAAATCTACATTGCTCCATCAGGAGTACAAAAAGAACGAATTCAGCCGGAAGATATGTTTGTTTGCGACATAAAT
GAGCAGGATATCAGTGGACCTCCATCATACAAGAATCTAAAGAAGAGTCAATGTACTCCTCTCTTTATGAATGCTTATAC
CATAAGAGGAGCTGGAGCAGTGATCCACAGTCATTCGAAGGCTGCCGTCATGGCTACCCTTATCTTTCCAGGACATGAGT
TTAAAATTACGCATCAAGAGATGATAAAAGGAATCAGAAAATGTACCTCAGGAGGGTGTTATAGATACTATGATACACTA
GTGGTCCCCATTGTTGAGAACACACCTGAAGAGAAGGATCTTAAAGAACGAATGGCTCAAGCAATGAATCAATACCCGGA
TTCCTGTGCTGTATTAGTGAGGCGTCACGGAGTATATGTATGGGGAGAGACTTGGGAAAGGGCCAAAACCATGTGTGAGT
GCTATGACTACTTGTTTGATATTGCGGTACAGATGAAGATGATAGGATTGGACCCTTCAGAGCGTCCAGCTGGCGAAAAT
GGAATTGTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 23 .31 RPM |
| SRP007412_cerebellum | 14 .47 RPM |
| SRP007412_heart | 11 .78 RPM |
| SRP007412_kidney | 21 .61 RPM |
| SRP007412_liver | 10 .85 RPM |
| SRP007412_testis | 13 .88 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000016758 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000149089 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022940 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000003361 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003499 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011523 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004390 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oana_63 | 66.09 | 95.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_oana_85 | 67.31 | 62.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_oana_96 | 65.17 | 73.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_oana_108 | 66.85 | 75.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_oana_109 | 59.54 | 52.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_oana_121 | 68.00 | 60.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOANG00000007394 retrocopies