Parental gene:

TAF11, ENSNLEG00000008457

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397446.1:823136..833708(-)


>ENSNLEG00000008457
ATGAGTCCTCTAGTTCTCTACGCGCGCCTCAAAATGACCCCTCAGGAGAGAGGTAGGGGTGATGTCATCGCTGCGCGACG
ACAGGAAGTAAGATCCTGGCATGTGCAGCTCGGGGTTCCGAGCTTCTGCCTCAGACGTTTCCGCGATCTCTTCTCCCTTC
CAATCCTATCCGTGATGGACGATGCCCACGAGTCGCCCTCCGACAAAGGTGGAGAGACAGGGGAGTCGGATGAGACGGCC
GCTGCGCCCGGGGACCCGGGGGCTACCGACACGGATGGAATCCCAGAGGAAACTGACGGAGACGCAGATGCGGACTTGAA
AGAAGCTGCAGCGGAGGAAGGCGAGCTCAAGAGTCAGGATGTCTCAGATTTAACAACAGTTGAAAGGGAAGACTCATCAT
TACTTACTCCTGCAGCCAAAAAACTGAAAATAGATACCAAAGAAAAGAAAGAGAAAAAGCAGAAAGTAGATGAAGATGAG
ATTCAGAAGATGCAAATCCTGGTTTCTTCTTTTTCTGAGGAGCAGCTGAACCGTTATGAAATGTATCGCCGCTCAGCTTT
CCCTAAGGCAGCCATCAAAAGGCTGATCCAGTCCATCACTGGCACCTCTGTGTCTCAGAATGTTGTTATTGCTATGTCTG
GTATTTCCAAGGTTTTCGTCGGGGAGGTGGTAGAAGAAGCACTGGATGTGTGTGAGAAGTGGGGAGAAATGCCGCCACTA
CAACCCAAACATATGAGGGAAGCCGTTAGAAGGTTAAAGTCAAAAGGACAGATCCCTAACTCAAAGCACAAAAAAATCAT
CTTCTTCTAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016887 ortholog_one2one 1 retrogene
retro_btau_218,
Callithrix jacchus ENSCJAG00000015388 ortholog_one2one 5 retrogenes
retro_cjac_1342, retro_cjac_1980, retro_cjac_2310, retro_cjac_2402, retro_cjac_2657,
Cavia porcellus ENSCPOG00000015428 ortholog_one2one 1 retrogene
retro_cpor_629,
Dipodomys ordii ENSDORG00000009352 ortholog_one2many 1 retrogene
retro_dord_4,
Equus caballus ENSECAG00000016725 ortholog_one2one 1 retrogene
retro_ecab_83,
Felis catus ENSFCAG00000022931 ortholog_one2one 1 retrogene
retro_fcat_1628,
Homo sapiens ENSG00000064995 ortholog_one2one 15 retrogenes
retro_hsap_3139, retro_hsap_3140, retro_hsap_3141, retro_hsap_3142, retro_hsap_3143, retro_hsap_3144, retro_hsap_3145, retro_hsap_3146, retro_hsap_3147, retro_hsap_3148, retro_hsap_3149, retro_hsap_3295, retro_hsap_3296, retro_hsap_3297, retro_hsap_3298,
Loxodonta africana ENSLAFG00000011482 ortholog_one2one 1 retrogene
retro_lafr_1108,
Microcebus murinus ENSMICG00000014063 ortholog_one2one 1 retrogene
retro_mmur_1196,
Myotis lucifugus ENSMLUG00000001766 ortholog_one2one 1 retrogene
retro_mluc_87,
Otolemur garnettii ENSOGAG00000008522 ortholog_one2one 2 retrogenes
retro_ogar_3055, retro_ogar_922,
Pongo abelii ENSPPYG00000016521 ortholog_one2one 1 retrogene
retro_pabe_200,
Pan troglodytes ENSPTRG00000018075 ortholog_one2one 9 retrogenes
retro_ptro_2123, retro_ptro_2124, retro_ptro_2125, retro_ptro_2126, retro_ptro_2127, retro_ptro_2128, retro_ptro_2129, retro_ptro_2130, retro_ptro_2977,
Tursiops truncatus ENSTTRG00000007855 ortholog_one2one 1 retrogene
retro_ttru_1063,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_149 55.74 67.66
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2. retro_nleu_151 56.86 75.84
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3. retro_nleu_152 56.80 75.84
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4. retro_nleu_1742 58.33 75.84
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5. retro_nleu_1743 64.33 58.36
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6. retro_nleu_2976 56.25 75.84
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7. retro_nleu_2977 55.05 80.67
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8. retro_nleu_2998 58.33 75.84
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9. retro_nleu_3041 56.10 75.84
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10. retro_nleu_3042 54.39 84.39
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11. retro_nleu_3043 57.87 73.23
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12. retro_nleu_3044 57.07 75.84
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13. retro_nleu_3049 58.49 78.81
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14. retro_nleu_3050 59.31 75.84
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15. retro_nleu_3051 60.29 75.84
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16. retro_nleu_3053 56.86 75.84
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17. retro_nleu_3054 58.05 75.84
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18. retro_nleu_3055 53.85 76.95
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19. retro_nleu_3081 58.33 75.84
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20. retro_nleu_3082 57.35 75.84
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21. retro_nleu_3083 57.35 75.84
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22. retro_nleu_3084 58.33 75.84
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23. retro_nleu_3093 63.58 56.13
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24. retro_nleu_3094 57.84 75.84
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25. retro_nleu_3109 56.35 73.23
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26. retro_nleu_3113 57.84 75.84
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27. retro_nleu_3120 56.86 75.84
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28. retro_nleu_3125 60.74 60.59
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29. retro_nleu_3127 63.82 56.13
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Download FASTA sequences of all ENSNLEG00000008457 retrocopies