Parental gene: | Tsnax, ENSMUSG00000056820 |
| Aliases: | Tsnax, R74833, Trax |
| Description: | translin-associated factor X [Source:MGI Symbol;Acc:MGI:1855672] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 8:125012996..125034192(+) |
>ENSMUSG00000056820
ATGAACGGCAAAGAAGGACCAGGAGGGTTCAGGAAGAGGAAGCATGACACCTTCCCACATAACCAAAGGAGAGAGGGGAA
GGATGCCAGTTTGTCTTCGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGGAGCTGGACGCCAGGCACGACAAATATG
AGAGACTCGTGAAGCTAAGCCGGGATATTACTGTGGAGAGTAAGAGGACAATTTTTCTTCTCCATAGGATTACAAGTGCT
CCTGATATGGAGGAGATACTGACTGAATCAGAAAGTAAGCTGGATGGTGTCAGACAGAAGATCCTGCAGGTAGCCCAAGA
GCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGGACTGCAGGAATACGTGGAGGCTGTCTCTTTTC
AACACTTCATCAAAACTCGTTCATTGATCAGTATGGAAGAGATTAACAAGCAGTTGACATTTACAGCAGAAGACAGTGGG
AAAGAGAGCAAGACTCCTCCCGCGGAAGGACAAGAGAAGCAGCTGGTTACATGGAGACTGAAGCTCACCCCTGTTGACTA
CCTGCTGGGCGTGGCCGACCTAACTGGAGAGTTGATGCGGATGTGTATTAACAGTGTGGGGAACGGGGACATCGACACCC
CCTTTGAAGTGAGCCAGTTTTTACGCCAGGTTTACGATGGGTTCTCGTTCATTGGCAACACTGGGCCCTATGAGGTCTCT
AAGAAGCTGTACACCTTGAAACAGAGCCTGGCCAAAGTGGAGAACGCTTGCTATGCCCTTAAAGTCCGGGGTTCTGAGAT
TCCTAAGCACATGCTGGCAGATGTGTTTTCAGTTAAAACAGACATGATTGATCAGGAAGAGAGCATTTCTTAA
ATGAACGGCAAAGAAGGACCAGGAGGGTTCAGGAAGAGGAAGCATGACACCTTCCCACATAACCAAAGGAGAGAGGGGAA
GGATGCCAGTTTGTCTTCGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGGAGCTGGACGCCAGGCACGACAAATATG
AGAGACTCGTGAAGCTAAGCCGGGATATTACTGTGGAGAGTAAGAGGACAATTTTTCTTCTCCATAGGATTACAAGTGCT
CCTGATATGGAGGAGATACTGACTGAATCAGAAAGTAAGCTGGATGGTGTCAGACAGAAGATCCTGCAGGTAGCCCAAGA
GCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGGACTGCAGGAATACGTGGAGGCTGTCTCTTTTC
AACACTTCATCAAAACTCGTTCATTGATCAGTATGGAAGAGATTAACAAGCAGTTGACATTTACAGCAGAAGACAGTGGG
AAAGAGAGCAAGACTCCTCCCGCGGAAGGACAAGAGAAGCAGCTGGTTACATGGAGACTGAAGCTCACCCCTGTTGACTA
CCTGCTGGGCGTGGCCGACCTAACTGGAGAGTTGATGCGGATGTGTATTAACAGTGTGGGGAACGGGGACATCGACACCC
CCTTTGAAGTGAGCCAGTTTTTACGCCAGGTTTACGATGGGTTCTCGTTCATTGGCAACACTGGGCCCTATGAGGTCTCT
AAGAAGCTGTACACCTTGAAACAGAGCCTGGCCAAAGTGGAGAACGCTTGCTATGCCCTTAAAGTCCGGGGTTCTGAGAT
TCCTAAGCACATGCTGGCAGATGTGTTTTCAGTTAAAACAGACATGATTGATCAGGAAGAGAGCATTTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 151 .86 RPM |
| SRP007412_cerebellum | 106 .64 RPM |
| SRP007412_heart | 69 .36 RPM |
| SRP007412_kidney | 56 .44 RPM |
| SRP007412_liver | 27 .14 RPM |
| SRP007412_testis | 50 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002637 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006963 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000028088 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015591 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005575 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000024989 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_393 | 92.77 | 56.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000056820 retrocopies