Parental gene: | Pqlc3, ENSMUSG00000045679 |
| Aliases: | Pqlc3, C78076, E030024M05Rik |
| Description: | PQ loop repeat containing [Source:MGI Symbol;Acc:MGI:2444067] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 12:16988647..17000408(-) |
>ENSMUSG00000045679
ATGGAGGCCGGACTGCTATGGTTCTGCAACTGGAGCACGCTGGGCGTCTGCGCCGCACTCAAGCTGCCGCAGATTTACGC
GCAGCTGGCGGCGCGCAGCGCGCGGGGCATCAGCCTCCCTAGTTTACTTTTGGAGCTGGCGGGGTTCCTGGTCTTCCTTC
GTTATCAGCATTACTATGGGAACCCACTGCTCACCTATCTGGAATACCCCATTCTCATCGCACAAGACATTGTCCTCCTG
CTCTTCGTCTTTCATTTCAATGGGAACGTGAAGCAAGCCTTACCCTACATGGCCGTATTTGTGTCTTCTTGGTTCATCCT
CAGCCTGCAGAAATGGATCATCGACTTGGCCATGAACTTATGCACAGTCATTAGTGCAGCCAGTAAGTTTGCCCAGCTCC
AGTATTTGTGGAAGGTACAAGATTCAGGAGCTGTGAGCGCACTGACCTGGGGCCTTTCTGCCTACACCTGTGCAACAAGA
ATAATAACAACTTTAATGACCACCAATGACTTGACAATTCTTATACGTTTTGTGATCATGTTGGCTTTAAATATATGGGT
AACAGCAACAGTACTTCACTACCGGAAGTCTGCCACCAAAGCTGAATGA
ATGGAGGCCGGACTGCTATGGTTCTGCAACTGGAGCACGCTGGGCGTCTGCGCCGCACTCAAGCTGCCGCAGATTTACGC
GCAGCTGGCGGCGCGCAGCGCGCGGGGCATCAGCCTCCCTAGTTTACTTTTGGAGCTGGCGGGGTTCCTGGTCTTCCTTC
GTTATCAGCATTACTATGGGAACCCACTGCTCACCTATCTGGAATACCCCATTCTCATCGCACAAGACATTGTCCTCCTG
CTCTTCGTCTTTCATTTCAATGGGAACGTGAAGCAAGCCTTACCCTACATGGCCGTATTTGTGTCTTCTTGGTTCATCCT
CAGCCTGCAGAAATGGATCATCGACTTGGCCATGAACTTATGCACAGTCATTAGTGCAGCCAGTAAGTTTGCCCAGCTCC
AGTATTTGTGGAAGGTACAAGATTCAGGAGCTGTGAGCGCACTGACCTGGGGCCTTTCTGCCTACACCTGTGCAACAAGA
ATAATAACAACTTTAATGACCACCAATGACTTGACAATTCTTATACGTTTTGTGATCATGTTGGCTTTAAATATATGGGT
AACAGCAACAGTACTTCACTACCGGAAGTCTGCCACCAAAGCTGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 4 .88 RPM |
| SRP007412_cerebellum | 6 .99 RPM |
| SRP007412_heart | 4 .98 RPM |
| SRP007412_kidney | 6 .45 RPM |
| SRP007412_liver | 1 .64 RPM |
| SRP007412_testis | 1 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006017 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006801 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000015960 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000009376 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1352 | 88.61 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2875 | 72.26 | 91.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000045679 retrocopies