Parental gene: | Lgalsl, ENSMUSG00000042363 |
| Aliases: | Lgalsl, 1110067D22Rik, A530071M23, Grpa, Hspc159, Lgalsla |
| Description: | lectin, galactoside binding-like [Source:MGI Symbol;Acc:MGI:1916114] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:20823575..20831056(-) |
>ENSMUSG00000042363
ATGGCGGGGTCGGTGGCCGACAGCGACGCCGTGGTGAAACTTGATGATGGGCACTTAAACAACTCCTTGGGTTCTCCAGT
TCAAGCCGACGTGTACTTCCCACGACTGATAGTTCCATTTTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGG
TATTAGTGATGGGCATCGTAGATCTCAACCCCGAAAGCTTTGCCATCAGCTTGACCTGTGGAGACTCTGAAGATCCTCCT
GCCGATGTGGCAATTGAACTCAAAGCTGTGTTCACAGACCGGCAGCTGCTCAGAAACTCTTGTATCTCAGGAGAAAGAGG
CGAGGAGCAGTCGGCAATCCCTTACTTTCCATTCATCCCAGACCAGCCGTTCAGGGTGGAGATTCTTTGCGAGCACCCAC
GTTTCAGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTATCACCGTATTCAAACATTATCTGCAATTGACACCATA
AAGATCAATGGGGACCTCCAGATCACCAAACTTGGCTGA
ATGGCGGGGTCGGTGGCCGACAGCGACGCCGTGGTGAAACTTGATGATGGGCACTTAAACAACTCCTTGGGTTCTCCAGT
TCAAGCCGACGTGTACTTCCCACGACTGATAGTTCCATTTTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGG
TATTAGTGATGGGCATCGTAGATCTCAACCCCGAAAGCTTTGCCATCAGCTTGACCTGTGGAGACTCTGAAGATCCTCCT
GCCGATGTGGCAATTGAACTCAAAGCTGTGTTCACAGACCGGCAGCTGCTCAGAAACTCTTGTATCTCAGGAGAAAGAGG
CGAGGAGCAGTCGGCAATCCCTTACTTTCCATTCATCCCAGACCAGCCGTTCAGGGTGGAGATTCTTTGCGAGCACCCAC
GTTTCAGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTATCACCGTATTCAAACATTATCTGCAATTGACACCATA
AAGATCAATGGGGACCTCCAGATCACCAAACTTGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 66 .86 RPM |
| SRP007412_cerebellum | 52 .50 RPM |
| SRP007412_heart | 21 .23 RPM |
| SRP007412_kidney | 15 .67 RPM |
| SRP007412_liver | 5 .79 RPM |
| SRP007412_testis | 2 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001067 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000000156 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000015222 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000001209 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000003226 | ortholog_many2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000057554 | other_paralog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011885 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_272 | 82.22 | 78.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1637 | 76.23 | 69.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2942 | 78.49 | 54.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000042363 retrocopies