Parental gene: | Deb1, ENSMUSG00000032526 |
| Aliases: | Deb1, 1110020I04Rik, AI463209, Ss18l2 |
| Description: | differentially expressed in B16F10 1 [Source:MGI Symbol;Acc:MGI:1349474] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 9:121710388..121712921(+) |
>ENSMUSG00000032526
ATGTCTGTCATCTTCGCTCCTGACTGGCTACGCGGCAAAGCCAAGGTCAATCAAGAGACAATCCAGCGGCTCCTGGAGGA
GAATGACCAGCTGATCCGCTGTATCGTGGAGTATCAGAATAAGGGCCGAGCGAACGAGTGCGTCCAGTATCAGCATGTGT
TACATAGAAATCTCATTTATTTAGCTACCATCGCAGACGCCAACACAAGCAGTCTCACAAAGGCAGTGGAGTAG
ATGTCTGTCATCTTCGCTCCTGACTGGCTACGCGGCAAAGCCAAGGTCAATCAAGAGACAATCCAGCGGCTCCTGGAGGA
GAATGACCAGCTGATCCGCTGTATCGTGGAGTATCAGAATAAGGGCCGAGCGAACGAGTGCGTCCAGTATCAGCATGTGT
TACATAGAAATCTCATTTATTTAGCTACCATCGCAGACGCCAACACAAGCAGTCTCACAAAGGCAGTGGAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 14 .72 RPM |
| SRP007412_cerebellum | 13 .24 RPM |
| SRP007412_heart | 26 .49 RPM |
| SRP007412_kidney | 15 .40 RPM |
| SRP007412_liver | 16 .30 RPM |
| SRP007412_testis | 1 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000000989 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000015005 | ortholog_one2many | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000014065 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007192 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000021542 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013024 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000037013 | within_species_paralog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000015198 | possible_ortholog | 4 retrogenes | |
| Sorex araneus | ENSSARG00000014056 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007658 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1247 | 53.97 | 80.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1827 | 54.41 | 85.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3284 | 51.90 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000032526 retrocopies