Parental gene: | Nudt21, ENSMUSG00000031754 |
| Aliases: | None |
| Description: | nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Source:MGI Symbol;Acc:MGI:1915469] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 8:94017769..94037021(-) |
>ENSMUSG00000031754
ATGTCTGTGGTGCCGCCCAATCGCTCGCAGACGGGCTGGCCCCGGGGGGTCAACCAGTTCGGCAACAAGTACATCCAGCA
GACCAAGCCCCTCACCCTGGAGCGCACCATTAATCTGTACCCGCTTACCAATTATACTTTTGGTACAAAGGAGCCCCTCT
ATGAGAAGGACAGCTCTGTTGCAGCCAGATTTCAGCGCATGAGGGAGGAATTTGATAAGATTGGGATGAGAAGGACTGTA
GAAGGGGTTCTGATTGTTCATGAACACCGCCTGCCCCACGTGCTCCTGCTGCAGCTGGGGACAACTTTCTTCAAATTACC
TGGTGGGGAACTTAACCCAGGAGAAGATGAAGTTGAAGGACTAAAACGCTTAATGACAGAGATACTTGGTCGTCAAGATG
GAGTCCTGCAAGACTGGGTCATTGATGACTGCATTGGGAACTGGTGGAGACCAAATTTTGAACCTCCTCAGTATCCGTAT
ATTCCTGCACATATAACAAAACCCAAGGAACATAAGAAGTTGTTTCTGGTTCAGCTTCAAGAGAAAGCCTTGTTTGCAGT
CCCTAAAAATTACAAGCTGGTAGCTGCACCATTGTTTGAGCTGTATGACAATGCACCGGGGTATGGACCCATCATTTCTA
GTCTTCCTCAGCTGCTGAGCAGGTTCAATTTTATATACAACTGA
ATGTCTGTGGTGCCGCCCAATCGCTCGCAGACGGGCTGGCCCCGGGGGGTCAACCAGTTCGGCAACAAGTACATCCAGCA
GACCAAGCCCCTCACCCTGGAGCGCACCATTAATCTGTACCCGCTTACCAATTATACTTTTGGTACAAAGGAGCCCCTCT
ATGAGAAGGACAGCTCTGTTGCAGCCAGATTTCAGCGCATGAGGGAGGAATTTGATAAGATTGGGATGAGAAGGACTGTA
GAAGGGGTTCTGATTGTTCATGAACACCGCCTGCCCCACGTGCTCCTGCTGCAGCTGGGGACAACTTTCTTCAAATTACC
TGGTGGGGAACTTAACCCAGGAGAAGATGAAGTTGAAGGACTAAAACGCTTAATGACAGAGATACTTGGTCGTCAAGATG
GAGTCCTGCAAGACTGGGTCATTGATGACTGCATTGGGAACTGGTGGAGACCAAATTTTGAACCTCCTCAGTATCCGTAT
ATTCCTGCACATATAACAAAACCCAAGGAACATAAGAAGTTGTTTCTGGTTCAGCTTCAAGAGAAAGCCTTGTTTGCAGT
CCCTAAAAATTACAAGCTGGTAGCTGCACCATTGTTTGAGCTGTATGACAATGCACCGGGGTATGGACCCATCATTTCTA
GTCTTCCTCAGCTGCTGAGCAGGTTCAATTTTATATACAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 12 .90 RPM |
| SRP007412_cerebellum | 10 .77 RPM |
| SRP007412_heart | 3 .27 RPM |
| SRP007412_kidney | 4 .87 RPM |
| SRP007412_liver | 3 .85 RPM |
| SRP007412_testis | 5 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012724 | possible_ortholog | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000003705 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000008669 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000028465 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003451 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017224 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014888 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000006689 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000009651 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000029848 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013545 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1949 | 82.11 | 53.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1950 | 80.00 | 53.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2142 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000031754 retrocopies