Parental gene: | U2af2, ENSMUSG00000030435 |
| Aliases: | U2af2, 65kDa |
| Description: | U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 7:5062142..5079945(+) |
>ENSMUSG00000030435
ATGTCGGACTTCGACGAGTTCGAGCGGCAGCTCAACGAGAATAAACAAGAGCGGGACAAGGAGAATCGGCACAGGAAGCG
TAGTCACAGTCGCTCTCGAAGCCGAGATCGAAAGCGCAGGAGCAGGAGCCGAGATCGGCGCAACCGGGACCAGCGCAGTG
CCTCTCGGGATAGGAGACGACGAAGCAAACCTTTGACCAGAGGCGCTAAAGAGGAGCACGGTGGATTGATTCGTTCTCCC
CGCCATGAGAAGAAGAAGAAGGTGCGTAAATACTGGGACGTGCCACCGCCTGGCTTTGAGCACATCACCCCAATGCAGTA
CAAGGCCATGCAAGCTGCGGGTCAGATTCCAGCCACTGCCCTTCTCCCGACCATGACTCCTGATGGTCTGGCTGTGACCC
CAACGCCAGTGCCTGTGGTTGGGAGCCAGATGACCAGACAGGCCAGACGTCTCTACGTGGGCAACATCCCTTTTGGCATT
ACTGAGGAGGCTATGATGGACTTCTTCAACGCCCAGATGCGCTTGGGAGGGTTGACTCAGGCCCCTGGCAACCCAGTCTT
GGCTGTGCAGATAAATCAAGACAAGAATTTTGCCTTTTTGGAGTTCCGGTCAGTGGATGAGACGACCCAGGCCATGGCAT
TTGATGGCATCATCTTCCAGGGCCAGTCATTGAAGATTCGAAGGCCTCATGACTATCAGCCATTGCCTGGCATGTCAGAG
AACCCCTCTGTTTATGTGCCTGGAGTTGTATCCACTGTAGTCCCAGATTCTGCCCACAAGCTGTTCATCGGGGGTTTGCC
CAATTACCTAAATGATGACCAGGTAAAAGAGCTGCTGACATCCTTTGGGCCTCTCAAGGCCTTCAACTTGGTTAAGGATA
GTGCCACAGGGCTCTCCAAGGGCTATGCCTTCTGTGAGTACGTGGACATCAACGTCACAGATCAGGCCATTGCGGGGCTG
AATGGGATGCAGCTAGGGGACAAGAAGCTGCTTGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGGTGAGCCT
CCCGAGCACCATCAATCAGACACCTGTGACCCTTCAAGTGCCCGGCCTGATGAGCTCTCAGGTGCAGATGGGCGGTCACC
CAACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGATGAGGAGTATGAGGAGATTGTAGAG
GACGTACGAGACGAGTGCAGCAAGTATGGGTTGGTCAAATCCATTGAAATTCCCCGCCCCGTGGACGGCGTCGAGGTGCC
TGGCTGTGGAAAGATCTTCGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGTCTAACCGGTCGCAAGT
TCGCCAACAGAGTGGTGGTCACAAAATACTGTGACCCTGATTCTTACCACCGTCGGGACTTCTGGTAG
ATGTCGGACTTCGACGAGTTCGAGCGGCAGCTCAACGAGAATAAACAAGAGCGGGACAAGGAGAATCGGCACAGGAAGCG
TAGTCACAGTCGCTCTCGAAGCCGAGATCGAAAGCGCAGGAGCAGGAGCCGAGATCGGCGCAACCGGGACCAGCGCAGTG
CCTCTCGGGATAGGAGACGACGAAGCAAACCTTTGACCAGAGGCGCTAAAGAGGAGCACGGTGGATTGATTCGTTCTCCC
CGCCATGAGAAGAAGAAGAAGGTGCGTAAATACTGGGACGTGCCACCGCCTGGCTTTGAGCACATCACCCCAATGCAGTA
CAAGGCCATGCAAGCTGCGGGTCAGATTCCAGCCACTGCCCTTCTCCCGACCATGACTCCTGATGGTCTGGCTGTGACCC
CAACGCCAGTGCCTGTGGTTGGGAGCCAGATGACCAGACAGGCCAGACGTCTCTACGTGGGCAACATCCCTTTTGGCATT
ACTGAGGAGGCTATGATGGACTTCTTCAACGCCCAGATGCGCTTGGGAGGGTTGACTCAGGCCCCTGGCAACCCAGTCTT
GGCTGTGCAGATAAATCAAGACAAGAATTTTGCCTTTTTGGAGTTCCGGTCAGTGGATGAGACGACCCAGGCCATGGCAT
TTGATGGCATCATCTTCCAGGGCCAGTCATTGAAGATTCGAAGGCCTCATGACTATCAGCCATTGCCTGGCATGTCAGAG
AACCCCTCTGTTTATGTGCCTGGAGTTGTATCCACTGTAGTCCCAGATTCTGCCCACAAGCTGTTCATCGGGGGTTTGCC
CAATTACCTAAATGATGACCAGGTAAAAGAGCTGCTGACATCCTTTGGGCCTCTCAAGGCCTTCAACTTGGTTAAGGATA
GTGCCACAGGGCTCTCCAAGGGCTATGCCTTCTGTGAGTACGTGGACATCAACGTCACAGATCAGGCCATTGCGGGGCTG
AATGGGATGCAGCTAGGGGACAAGAAGCTGCTTGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGGTGAGCCT
CCCGAGCACCATCAATCAGACACCTGTGACCCTTCAAGTGCCCGGCCTGATGAGCTCTCAGGTGCAGATGGGCGGTCACC
CAACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGATGAGGAGTATGAGGAGATTGTAGAG
GACGTACGAGACGAGTGCAGCAAGTATGGGTTGGTCAAATCCATTGAAATTCCCCGCCCCGTGGACGGCGTCGAGGTGCC
TGGCTGTGGAAAGATCTTCGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGTCTAACCGGTCGCAAGT
TCGCCAACAGAGTGGTGGTCACAAAATACTGTGACCCTGATTCTTACCACCGTCGGGACTTCTGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 72 .96 RPM |
| SRP007412_cerebellum | 76 .86 RPM |
| SRP007412_heart | 54 .70 RPM |
| SRP007412_kidney | 63 .72 RPM |
| SRP007412_liver | 43 .15 RPM |
| SRP007412_testis | 51 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000018056 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011051 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000004810 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007206 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_991 | 94.58 | 95.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2251 | 92.28 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3663 | 87.42 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000030435 retrocopies