Parental gene: | Stmn1, ENSMUSG00000028832 |
| Aliases: | Stmn1, 19k, Lag, Lap18, Op18, P18, P19, Pig, Pp17, Pp18, Pp19, Pr22, Smn |
| Description: | stathmin 1 [Source:MGI Symbol;Acc:MGI:96739] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 4:134468319..134473843(+) |
>ENSMUSG00000028832
ATGGCATCTTCTGATATTCAGGTGAAAGAGCTGGAGAAGCGCGCTTCAGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCG
GTCAAAAGAATCTGTCCCCGATTTCCCCCTTTCCCCCCCAAAGAAGAAGGACCTTTCCCTGGAGGAAATCCAGAAGAAAT
TAGAAGCTGCAGAAGAAAGACGCAAGTCTCATGAGGCGGAAGTCTTGAAGCAGCTCGCGGAGAAGCGGGAGCATGAGAAG
GAGGTGCTCCAGAAAGCCATCGAGGAGAACAACAACTTCAGCAAGATGGCGGAGGAGAAGCTGACCCACAAAATGGAGGC
TAACAAAGAGAACCGGGAGGCGCAGATGGCGGCCAAGCTGGAGCGCTTGCGAGAGAAGGACAAGCACGTGGAAGAGGTGC
GGAAGAACAAAGAATCCAAAGACCCCGCGGATGAGACTGAGGCTGACTAA
ATGGCATCTTCTGATATTCAGGTGAAAGAGCTGGAGAAGCGCGCTTCAGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCG
GTCAAAAGAATCTGTCCCCGATTTCCCCCTTTCCCCCCCAAAGAAGAAGGACCTTTCCCTGGAGGAAATCCAGAAGAAAT
TAGAAGCTGCAGAAGAAAGACGCAAGTCTCATGAGGCGGAAGTCTTGAAGCAGCTCGCGGAGAAGCGGGAGCATGAGAAG
GAGGTGCTCCAGAAAGCCATCGAGGAGAACAACAACTTCAGCAAGATGGCGGAGGAGAAGCTGACCCACAAAATGGAGGC
TAACAAAGAGAACCGGGAGGCGCAGATGGCGGCCAAGCTGGAGCGCTTGCGAGAGAAGGACAAGCACGTGGAAGAGGTGC
GGAAGAACAAAGAATCCAAAGACCCCGCGGATGAGACTGAGGCTGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 81 .47 RPM |
| SRP007412_cerebellum | 59 .88 RPM |
| SRP007412_heart | 2 .40 RPM |
| SRP007412_kidney | 6 .99 RPM |
| SRP007412_liver | 1 .34 RPM |
| SRP007412_testis | 54 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013761 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009462 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000011075 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000006089 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006493 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000021708 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1660 | 83.22 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2470 | 99.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3383 | 69.09 | 72.48 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000028832 retrocopies