Parental gene:

Gdap2, ENSMUSG00000027865

Aliases:Gdap2, C77050, D3Ertd801e
Description:ganglioside-induced differentiation-associated-protein 2 [Source:MGI Symbol;Acc:MGI:1338001]
Organism:Mouse (Mus musculus)
Coordinates:3:100162380..100206981(+)


>ENSMUSG00000027865
ATGGATCCCTTGGGTGCACCTTCCCAGTTTGTGGATGTGGATACCCTGCTAAGCTGGGGCGACTCGTACGAAGATGAAGT
AGACTGCGCTGACAGTACTGCCGAGGCCTTCCAGGAAGACGCCAGCAGATCACCTTTTGTTTATAGTCGGGACGTCAATG
GAAAAGTGGTTCTTTGGAAAGGAGATGTGGCATTACTGAACTGCACAGCCATTGTGAATACCAGCAATGAAAGCCTCACA
GATAAGAACCCTGTGTCAGAGAGCATCTTCATGCTTGCGGGGCCAGATTTGAAGGAGGACCTTCAGAAACTCAAAGGTTG
CCGAACTGGTGAAGCAAAATTGACGAAAGGCTTTAACCTAGCTGCTCGGTTCATCATTCACACAGTGGGACCTAAGTACA
AGAGCCGCTACCGCACTGCAGCGGAGAGTTCCCTGTACAGCTGTTACAGAAACGTGCTTCAGCTGGCAAAAGAACAGTCC
ATGTCTTCTGTTGGCTTCTGTGTCATCAATTCTGCCAAGCGAGGTTATCCACTAGAAGATGCAACACACATCGCTCTTCG
TACTGTGAGGCGGTTCCTAGAGATCCATGGGGAAAACATTGAAAAAGTAGTATTTGCTGTCTCAGAACTCGAAGAGGCCA
CTTACCAAAAGCTGCTACCTCTGTACTTCCCAAGGTCATTAAAGGAGGAGATCCGGTCATTGCCGTACCTACCTGCAGAC
ATTGGAAATGCAGAAGGGGAGCCCGTGGTGCCCGAGCGGCAAATTAGAATCAGTGAGAAACCCGGTGCCTCGGAGGACAA
TGAAGAGGAAGATGAGGATGAAGGCTTGGGAGTGGATCTGTCTTTTATTGGCTCTCATGCTTTTGCTCGGATGGAAGGAG
ATATTGACAAGCAAAGAAAGTTGATCCTCCAGGGACAGTTGTCTGAAGCCGCCCTGCAGAAGCAGCATCAAAGAAATTAT
AATCGCTGGTTATGCCAAGCAAGATCTGAAGACCTGTCTGATATTGCTTCTCTGAAAGCTTTATACCAAACAGGGGTAGA
TAACTGTGGCCGCACAGTGATGGTGGTAGTTGGAAGAAACATTCCTGTGACACTGATAGATATGGACAAGGCCCTCTTGT
ATTTTATCCATGTAATGGATCACATTGCTGTGAAGGAGTATGTGCTGGTGTATTTCCACACACTGACCAGCGACTACAAT
CACCTGGACTCCGACTTCCTGAAGAAACTCTACGATGTGGTTGACATCAAATACAAGAGGAATTTGAAGGCTGTTTATTT
CGTTCATCCAACATTCCGTTCAAAGGTCTCAACATGGTTTTTCACCACCTTTTCTGTCTCAGGACTGAAGGACAAGATCC
ACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTTTCCTCCTTTTGTCCTTGAATAT
GACGCGAGGGAAAATGGGCCTTATTTTGCATCTTATCCTCCATCACCAGATTTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 28 .78 RPM
SRP007412_cerebellum 25 .05 RPM
SRP007412_heart 7 .22 RPM
SRP007412_kidney 12 .76 RPM
SRP007412_liver 21 .08 RPM
SRP007412_testis 21 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012907 ortholog_one2one 2 retrogenes
retro_chof_1607, retro_chof_2559,
Echinops telfairi ENSETEG00000004391 ortholog_one2one 1 retrogene
retro_etel_530,
Felis catus ENSFCAG00000003468 ortholog_one2one 1 retrogene
retro_fcat_1125,
Mus musculus ENSMUSG00000068205 within_species_paralog 1 retrogene
retro_mmus_1381,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2225 80.53 91.16
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000027865 retrocopies