Parental gene: | Rtfdc1, ENSMUSG00000027502 |
| Aliases: | Rtfdc1, 1700067C04Rik, 2410001C21Rik, 5730427M17Rik, AA589417 |
| Description: | replication termination factor 2 domain containing 1 [Source:MGI Symbol;Acc:MGI:1913654] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:172440555..172469908(+) |
>ENSMUSG00000027502
ATGGGTTGCGACGGAGGCACCATCCCCAAGAGGCACGAGCTGGTGAAGGGGCCGAAGAAGGTCGAGAAGGTTGACAAAGA
CGCTGAACTGGTAGCCCAATGGAACTACTGTACCCTAAGTCAGGAAATCCTGAGGCGCCCAATAGTTGCCTGTGAGCTTG
GCAGACTGTATAACAAAGACGCGGTCATCGAGTTTCTGTTGGACAAATCTGCTGAGAAGGCCCTGGGGAAGGCGGCATCG
CACATCAGAAGCATCAAGAATGTGACAGAGCTCAGGCTTTCTGACAACCCCGCCTGGGAAGGAGATAAAGGGAACACCAA
GGGCGACAAGCATGATGACCTCCAGAGAGCGCGGTTCATCTGCCCTGTGGTGGGCCTGGAGATGAATGGCCGGCACAGGT
TTTGCTTCCTCCGATGCTGCGGTTGTGTGTTTTCTGAACGCGCCTTGAAGGAGATAAAAGCTGAAGTGTGTCACACGTGT
GGGGCTGCCTTCCAGGAGGAGGACATCATTGTGCTCAATGGCACCAAGGAGGATGTGGAGATGCTGAAGAAGAGGATGGA
GGAGAGGAGGCTGAGGGCCAAGCTGGAAAAGAAAACAAAGAAACCGAAGACAGCGACCGAGTGTGCGTCAAAGCCGGGTA
CCACACAAGATTCCGCAGGGCCATCAAAAGTGAAGTCTGGCAAGCCTGAGGAGGCGGACCCTGATCCTAGAGAGAAGAAA
AGCACCCCGGCTCCCAGGGGCGCAGCAACTAATGGGAGTGCGTCTGGGAAAGTTGGCAAGCCCCCATGTGGGGCCCTGAA
GAGGTCCATTGCAGACAGCGAGGAGTCTGAAACCTACAAGTCTATCTTCACCAGCCACAGCTCTGCCAAGCGCTCCAAGG
AGGAGTCTGCGCACTGGGTCACCCACACATCCTACTGCTTCTGA
ATGGGTTGCGACGGAGGCACCATCCCCAAGAGGCACGAGCTGGTGAAGGGGCCGAAGAAGGTCGAGAAGGTTGACAAAGA
CGCTGAACTGGTAGCCCAATGGAACTACTGTACCCTAAGTCAGGAAATCCTGAGGCGCCCAATAGTTGCCTGTGAGCTTG
GCAGACTGTATAACAAAGACGCGGTCATCGAGTTTCTGTTGGACAAATCTGCTGAGAAGGCCCTGGGGAAGGCGGCATCG
CACATCAGAAGCATCAAGAATGTGACAGAGCTCAGGCTTTCTGACAACCCCGCCTGGGAAGGAGATAAAGGGAACACCAA
GGGCGACAAGCATGATGACCTCCAGAGAGCGCGGTTCATCTGCCCTGTGGTGGGCCTGGAGATGAATGGCCGGCACAGGT
TTTGCTTCCTCCGATGCTGCGGTTGTGTGTTTTCTGAACGCGCCTTGAAGGAGATAAAAGCTGAAGTGTGTCACACGTGT
GGGGCTGCCTTCCAGGAGGAGGACATCATTGTGCTCAATGGCACCAAGGAGGATGTGGAGATGCTGAAGAAGAGGATGGA
GGAGAGGAGGCTGAGGGCCAAGCTGGAAAAGAAAACAAAGAAACCGAAGACAGCGACCGAGTGTGCGTCAAAGCCGGGTA
CCACACAAGATTCCGCAGGGCCATCAAAAGTGAAGTCTGGCAAGCCTGAGGAGGCGGACCCTGATCCTAGAGAGAAGAAA
AGCACCCCGGCTCCCAGGGGCGCAGCAACTAATGGGAGTGCGTCTGGGAAAGTTGGCAAGCCCCCATGTGGGGCCCTGAA
GAGGTCCATTGCAGACAGCGAGGAGTCTGAAACCTACAAGTCTATCTTCACCAGCCACAGCTCTGCCAAGCGCTCCAAGG
AGGAGTCTGCGCACTGGGTCACCCACACATCCTACTGCTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 56 .58 RPM |
| SRP007412_cerebellum | 59 .96 RPM |
| SRP007412_heart | 29 .39 RPM |
| SRP007412_kidney | 47 .60 RPM |
| SRP007412_liver | 50 .03 RPM |
| SRP007412_testis | 54 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000027390 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000003143 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000009249 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004444 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_339 | 96.88 | 51.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000027502 retrocopies