Parental gene: | Tarbp2, ENSMUSG00000023051 |
| Aliases: | Tarbp2, Prbp, TRBP |
| Description: | TAR (HIV) RNA binding protein 2 [Source:MGI Symbol;Acc:MGI:103027] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 15:102518191..102523676(+) |
>ENSMUSG00000023051
ATGAGTGAAGAGGATCAGGGCTCCGGCACTACTACAGGCTGCGGGCTGCCCAGCATAGAGCAAATGCTGGCCGCCAACCC
GGGCAAGACCCCGATCAGCCTTCTTCAGGAGTATGGGACCAGAATAGGAAAGACGCCCGTGTACGACCTTCTCAAAGCCG
AGGGCCAAGCCCATCAACCTAATTTCACCTTTCGGGTCACCGTTGGCGACACCAGCTGCACTGGTCAGGGCCCCAGCAAG
AAGGCAGCCAAGCACAAGGCAGCTGAGGTGGCCCTCAAACACCTCAAAGGGGGGAGCATGCTGGAACCAGCCCTGGAGGA
CAGCAGTTCTTTTTCTCTCCTAGACTCTTCACCGCCTGAGGACACTCCTGTCGTTGCTGCAGAAGCTGCTGCCCCTGTTC
CATCTGCTGTACTAACCAGGAGCCCTCCCATGGAGATGCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAACCCCGTC
GGTGCTCTGCAGGAGCTGGTGGTGCAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCA
CCGCAAAGAGTTCACCATGACTTGCCGGGTGGAGCGTTTCATTGAGATTGGCAGTGGCACTTCCAAAAAGCTGGCAAAGC
GTAACGCAGCAGCTAAGATGCTCCTTCGAGTGCACACTGTACCTCTGGATGCCCGGGATGGCAATGAGGCAGAGCCTGAT
GACGATCATTTTTCCATTGGCGTGAGCTCCCGCCTGGATGGACTGAGGAATCGTGGGCCAGGCTGCACCTGGGATTCCTT
GCGGAATTCTGTGGGAGAAAAGATCCTATCCCTTCGCAGTTGCTCCGTGGGCTCTCTAGGGGCTCTGGGCTCTGCCTGCT
GCAGTGTCCTCAGTGAGCTCTCTGAGGAGCAGGCTTTCCATGTCAGCTATCTGGATATTGAGGAACTGAGCCTGAGTGGG
CTCTGCCAGTGCCTAGTGGAACTGTCCACCCAGCCAGCCACTGTGTGTTATGGTTCTGCAACCACCAGGGAGGCAGCCCG
AGGTGATGCTGCTCACCGCGCCCTACAGTACCTCAGGATCATGGCGGGTAGCAAGTAG
ATGAGTGAAGAGGATCAGGGCTCCGGCACTACTACAGGCTGCGGGCTGCCCAGCATAGAGCAAATGCTGGCCGCCAACCC
GGGCAAGACCCCGATCAGCCTTCTTCAGGAGTATGGGACCAGAATAGGAAAGACGCCCGTGTACGACCTTCTCAAAGCCG
AGGGCCAAGCCCATCAACCTAATTTCACCTTTCGGGTCACCGTTGGCGACACCAGCTGCACTGGTCAGGGCCCCAGCAAG
AAGGCAGCCAAGCACAAGGCAGCTGAGGTGGCCCTCAAACACCTCAAAGGGGGGAGCATGCTGGAACCAGCCCTGGAGGA
CAGCAGTTCTTTTTCTCTCCTAGACTCTTCACCGCCTGAGGACACTCCTGTCGTTGCTGCAGAAGCTGCTGCCCCTGTTC
CATCTGCTGTACTAACCAGGAGCCCTCCCATGGAGATGCAGCCCCCTGTCTCTCCTCAGCAGTCTGAGTGCAACCCCGTC
GGTGCTCTGCAGGAGCTGGTGGTGCAAAAAGGCTGGCGTTTGCCAGAGTACATGGTGACCCAAGAGTCTGGGCCTGCTCA
CCGCAAAGAGTTCACCATGACTTGCCGGGTGGAGCGTTTCATTGAGATTGGCAGTGGCACTTCCAAAAAGCTGGCAAAGC
GTAACGCAGCAGCTAAGATGCTCCTTCGAGTGCACACTGTACCTCTGGATGCCCGGGATGGCAATGAGGCAGAGCCTGAT
GACGATCATTTTTCCATTGGCGTGAGCTCCCGCCTGGATGGACTGAGGAATCGTGGGCCAGGCTGCACCTGGGATTCCTT
GCGGAATTCTGTGGGAGAAAAGATCCTATCCCTTCGCAGTTGCTCCGTGGGCTCTCTAGGGGCTCTGGGCTCTGCCTGCT
GCAGTGTCCTCAGTGAGCTCTCTGAGGAGCAGGCTTTCCATGTCAGCTATCTGGATATTGAGGAACTGAGCCTGAGTGGG
CTCTGCCAGTGCCTAGTGGAACTGTCCACCCAGCCAGCCACTGTGTGTTATGGTTCTGCAACCACCAGGGAGGCAGCCCG
AGGTGATGCTGCTCACCGCGCCCTACAGTACCTCAGGATCATGGCGGGTAGCAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 9 .86 RPM |
| SRP007412_cerebellum | 19 .93 RPM |
| SRP007412_heart | 16 .78 RPM |
| SRP007412_kidney | 11 .49 RPM |
| SRP007412_liver | 6 .99 RPM |
| SRP007412_testis | 63 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018668 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000139546 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012637 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017690 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004583 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005020 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2820 | 99.01 | 55.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000023051 retrocopies