Parental gene:

Spcs1, ENSMUSG00000021917

Aliases:Spcs1, 1810004F21Rik
Description:signal peptidase complex subunit 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1916269]
Organism:Mouse (Mus musculus)
Coordinates:14:30999825..31001672(-)


>ENSMUSG00000021917
ATGGCGCGGGGCGGGGCCAGGGGTTGTCCGTGCCCCTCGGAGACATCCGCTTCCGGGGCCACGGCCGAAGTGAAACGCTC
GGCTGGTCGGCCTTGCTCTCGATATCGACCCCCGCAAACTTTACTCCTTAATAATCGGCTACGTCCGTTTCGTTGTCGGT
ATCGGTCTTCAGCAACCATGCTGGAACACCTGAGTTCGCTGCCCACCCAGATGGATTACAAGGGGCAGAAACTAGCTGAA
CAGATGTTTCAGGGGATCATTCTTTTTTCTGCAATAGTTGGGTTTATCTACGGGTACGTGGCTGAACAGTTTGGGTGGAC
TGTCTACATAGTTATGGCCGGATTTGCTTTCTCCTGTTTGCTGACACTTCCTCCATGGCCTATCTACCGCCGCCATCCCC
TAAAGTGGTTACCTGTTCAAGACTTAGGCACAGAAGACAAGAAATCAGGGGACAGAAAAATTAAGAGGCATGCTAAAAAT
AACTGA

Library Parental gene expression (RPM)
SRP007412_brain 33 .36 RPM
SRP007412_cerebellum 26 .53 RPM
SRP007412_heart 29 .85 RPM
SRP007412_kidney 40 .50 RPM
SRP007412_liver 38 .40 RPM
SRP007412_testis 115 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000012421 ortholog_one2one 3 retrogenes
retro_dnov_2086, retro_dnov_2245, retro_dnov_698,
Dipodomys ordii ENSDORG00000000678 ortholog_one2one 4 retrogenes
retro_dord_273, retro_dord_274, retro_dord_686, retro_dord_734,
Equus caballus ENSECAG00000023559 possible_ortholog 1 retrogene
retro_ecab_86,
Erinaceus europaeus ENSEEUG00000007914 ortholog_one2one 1 retrogene
retro_eeur_25,
Echinops telfairi ENSETEG00000004020 ortholog_one2one 1 retrogene
retro_etel_1056,
Loxodonta africana ENSLAFG00000016073 ortholog_one2one 2 retrogenes
retro_lafr_575, retro_lafr_625,
Vicugna pacos ENSVPAG00000007380 ortholog_one2one 1 retrogene
retro_vpac_269,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2758 84.30 74.53
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2. retro_mmus_2928 75.19 80.75
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Download FASTA sequences of all ENSMUSG00000021917 retrocopies