Parental gene: | Pafah1b1, ENSMUSG00000020745 |
| Aliases: | Pafah1b1, LIS-1, Lis1, MMS10-U, Mdsh, Ms10u, Pafaha |
| Description: | platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 [Source:MGI Symbol;Acc:MGI:109520] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:74673948..74724670(-) |
>ENSMUSG00000020745
ATGGTGCTGTCCCAGAGACAACGAGATGAACTAAATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGC
ATATTCCGTTTTTAAAAAGGAAGCTGAACTAGATATGAATGAAGAATTAGATAAGAAGTATGCTGGTCTTTTGGAAAAAA
AATGGACATCTGTTATTAGATTACAAAAAAAGGTAATGGAATTAGAATCAAAACTAAATGAAGCAAAAGAAGAATTTACG
TCGGGTGGTCCTCTTGGTCAGAAACGGGACCCAAAAGAATGGATTCCCCGTCCACCTGAGAAATACGCATTGAGTGGTCA
TAGGAGTCCAGTTACTCGAGTCATTTTCCATCCTGTGTTCAGTGTTATGGTCTCTGCTTCAGAGGATGCTACAATTAAGG
TGTGGGATTATGAGACTGGAGATTTTGAGCGAACTCTCAAGGGCCATACAGACTCTGTACAGGACATTTCCTTTGACCAC
AGTGGCAAGCTTCTGGCTTCCTGTTCAGCAGATATGACGATTAAATTATGGGATTTTCAGGGTTTTGAATGCATCAGAAC
CATGCACGGTCACGATCACAATGTCTCTTCAGTAGCCATCATGCCTAATGGAGATCATATAGTGTCTGCCTCAAGGGATA
AAACTATAAAGATGTGGGAAGTGCAAACTGGCTACTGTGTGAAGACATTCACAGGACACAGAGAATGGGTACGTATGGTG
CGGCCAAATCAGGATGGCACTCTGATAGCCAGCTGTTCCAATGACCAGACTGTGCGTGTGTGGGTTGTAGCAACAAAGGA
ATGCAAGGCTGAGCTCCGAGAACATGAACATGTGGTGGAATGCATTTCCTGGGCTCCAGAAAGTTCATATTCTTCCATCT
CTGAAGCAACAGGATCTGAGACTAAAAAAAGTGGCAAGCCTGGACCTTTCTTGCTATCTGGTTCCAGAGACAAAACTATT
AAGATGTGGGACGTCAGTACTGGCATGTGCCTTATGACTCTTGTGGGTCATGATAACTGGGTACGTGGAGTTCTGTTCCA
TTCTGGGGGGAAGTTTATTTTGAGTTGTGCTGATGACAAGACCCTCCGTGTATGGGATTATAAGAACAAGCGATGCATGA
AGACCCTCAATGCGCATGAACACTTTGTTACCTCCTTGGATTTCCATAAGACGGCACCCTATGTGGTTACTGGCAGTGTA
GATCAAACAGTAAAGGTGTGGGAGTGCCGTTGA
ATGGTGCTGTCCCAGAGACAACGAGATGAACTAAATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGC
ATATTCCGTTTTTAAAAAGGAAGCTGAACTAGATATGAATGAAGAATTAGATAAGAAGTATGCTGGTCTTTTGGAAAAAA
AATGGACATCTGTTATTAGATTACAAAAAAAGGTAATGGAATTAGAATCAAAACTAAATGAAGCAAAAGAAGAATTTACG
TCGGGTGGTCCTCTTGGTCAGAAACGGGACCCAAAAGAATGGATTCCCCGTCCACCTGAGAAATACGCATTGAGTGGTCA
TAGGAGTCCAGTTACTCGAGTCATTTTCCATCCTGTGTTCAGTGTTATGGTCTCTGCTTCAGAGGATGCTACAATTAAGG
TGTGGGATTATGAGACTGGAGATTTTGAGCGAACTCTCAAGGGCCATACAGACTCTGTACAGGACATTTCCTTTGACCAC
AGTGGCAAGCTTCTGGCTTCCTGTTCAGCAGATATGACGATTAAATTATGGGATTTTCAGGGTTTTGAATGCATCAGAAC
CATGCACGGTCACGATCACAATGTCTCTTCAGTAGCCATCATGCCTAATGGAGATCATATAGTGTCTGCCTCAAGGGATA
AAACTATAAAGATGTGGGAAGTGCAAACTGGCTACTGTGTGAAGACATTCACAGGACACAGAGAATGGGTACGTATGGTG
CGGCCAAATCAGGATGGCACTCTGATAGCCAGCTGTTCCAATGACCAGACTGTGCGTGTGTGGGTTGTAGCAACAAAGGA
ATGCAAGGCTGAGCTCCGAGAACATGAACATGTGGTGGAATGCATTTCCTGGGCTCCAGAAAGTTCATATTCTTCCATCT
CTGAAGCAACAGGATCTGAGACTAAAAAAAGTGGCAAGCCTGGACCTTTCTTGCTATCTGGTTCCAGAGACAAAACTATT
AAGATGTGGGACGTCAGTACTGGCATGTGCCTTATGACTCTTGTGGGTCATGATAACTGGGTACGTGGAGTTCTGTTCCA
TTCTGGGGGGAAGTTTATTTTGAGTTGTGCTGATGACAAGACCCTCCGTGTATGGGATTATAAGAACAAGCGATGCATGA
AGACCCTCAATGCGCATGAACACTTTGTTACCTCCTTGGATTTCCATAAGACGGCACCCTATGTGGTTACTGGCAGTGTA
GATCAAACAGTAAAGGTGTGGGAGTGCCGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 584 .66 RPM |
| SRP007412_cerebellum | 498 .30 RPM |
| SRP007412_heart | 222 .43 RPM |
| SRP007412_kidney | 204 .08 RPM |
| SRP007412_liver | 85 .83 RPM |
| SRP007412_testis | 302 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000007168 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000010776 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000026917 | other_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007796 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008551 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000002826 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2988 | 82.85 | 66.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000020745 retrocopies