Parental gene: | Atp6ap1, ENSMUSG00000019087 |
| Aliases: | Atp6ap1, 16A, AC45, AI316502, AW108110, Atp6ip1, Atp6s1, C7-1, CF2, VATPS1, XAP-3, mFLJ00383 |
| Description: | ATPase, H+ transporting, lysosomal accessory protein 1 [Source:MGI Symbol;Acc:MGI:109629] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | X:74297096..74304721(+) |
>ENSMUSG00000019087
ATGATGGCGGCAACAGTGGTATCTCGGATACGGACGGGGACAGGGCGGGCTCCAGTCATGTGGCTGTCTCTGTCGTTGGT
GGCAGTGGCAGCAGCAGTGGCCACGGAGCAGCAGGTGCCACTGGTACTGTGGTCGAGTGACCGGAATCTGTGGGCTCCTG
TGGCCGACACACATGAGGGTCATATCACCAGCGATATGCAGCTTTCTACCTACTTAGACCCTGCCCTGGAGCTGGGTCCC
CGTAATGTACTGCTGTTCCTACAGGACAAGCTAAGCATTGAGGATTTCACAGCATACGGTGGTGTGTTTGGAAATAAGCA
GGACAGTGCCTTTTCTAACCTGGAGAATGCCCTGGACTTGGCCCCCTCCTCACTGGTGCTTCCTGCTGTGGACTGGTATG
CAATCAGCACTCTGACCACCTACCTACAGGAGAAGCTTGGGGCTAGCCCCTTGCATGTGGATCTAGCTACCTTAAAGGAG
CTGAAGCTCAATGCCAGCCTTCCTGCCCTGCTGCTCATCCGTCTGCCCTACACAGCCAGCTCCGGTCTGATGGCGCCCAG
GGAGGTCCTCACAGGTAACGATGAGGTCATCGGACAGGTACTGAGCACACTCAAGTCTGAAGATGTCCCTTACACCGCAG
CTCTTACTGCAGTCCGCCCTTCTAGAGTGGCCCGTGATATAACCATGGTGGCTGGGGGTCTAGGTCGCCAGCTGCTTCAG
ACTCAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCACAAAA
CTTCTCTGTGGCATACAAAGACGAGTGGAAAGACTTGACCTCCCTCACCTTTGGTGTGGAGAATCTTAACTTGACCGGCT
CCTTCTGGAATGACTCCTTTGCCATGCTTTCACTGACCTATGAGCCACTCTTTGGTGCAACAGTGACATTCAAGTTCATT
CTGGCTAGTCGCTTCTATCCAGTGTCTGCCCGATATTGGTTTGCCATGGAACGACTTGAAATCCACAGCAATGGCTCTGT
TGCCCATTTCAATGTTTCCCAAGTCACAGGACCTAGCATCTATTCTTTCCACTGTGAGTACGTCAGCAGTGTGAGCAAGA
AAGGCAATCTCCTTGTGACCAACGTGCCCTCAGTCTGGCAGATGACTCTTCATAACTTCCAGATCCAGGCCTTCAATGTG
ACTGGTGAACAGTTCTCCTATGCTAGCGACTGTGCTGGTTTCTTCTCTCCGGGCATCTGGATGGGTCTGCTCACCACCCT
CTTCATGCTTTTCATATTCACCTATGGTCTGCACATGATACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGG
GCCCCACCATCACTTTGACCCAGATTGTGTGA
ATGATGGCGGCAACAGTGGTATCTCGGATACGGACGGGGACAGGGCGGGCTCCAGTCATGTGGCTGTCTCTGTCGTTGGT
GGCAGTGGCAGCAGCAGTGGCCACGGAGCAGCAGGTGCCACTGGTACTGTGGTCGAGTGACCGGAATCTGTGGGCTCCTG
TGGCCGACACACATGAGGGTCATATCACCAGCGATATGCAGCTTTCTACCTACTTAGACCCTGCCCTGGAGCTGGGTCCC
CGTAATGTACTGCTGTTCCTACAGGACAAGCTAAGCATTGAGGATTTCACAGCATACGGTGGTGTGTTTGGAAATAAGCA
GGACAGTGCCTTTTCTAACCTGGAGAATGCCCTGGACTTGGCCCCCTCCTCACTGGTGCTTCCTGCTGTGGACTGGTATG
CAATCAGCACTCTGACCACCTACCTACAGGAGAAGCTTGGGGCTAGCCCCTTGCATGTGGATCTAGCTACCTTAAAGGAG
CTGAAGCTCAATGCCAGCCTTCCTGCCCTGCTGCTCATCCGTCTGCCCTACACAGCCAGCTCCGGTCTGATGGCGCCCAG
GGAGGTCCTCACAGGTAACGATGAGGTCATCGGACAGGTACTGAGCACACTCAAGTCTGAAGATGTCCCTTACACCGCAG
CTCTTACTGCAGTCCGCCCTTCTAGAGTGGCCCGTGATATAACCATGGTGGCTGGGGGTCTAGGTCGCCAGCTGCTTCAG
ACTCAGGTGGCATCTCCTGCGATCCATCCTCCTGTGAGTTACAATGACACTGCCCCAAGGATCCTGTTTTGGGCACAAAA
CTTCTCTGTGGCATACAAAGACGAGTGGAAAGACTTGACCTCCCTCACCTTTGGTGTGGAGAATCTTAACTTGACCGGCT
CCTTCTGGAATGACTCCTTTGCCATGCTTTCACTGACCTATGAGCCACTCTTTGGTGCAACAGTGACATTCAAGTTCATT
CTGGCTAGTCGCTTCTATCCAGTGTCTGCCCGATATTGGTTTGCCATGGAACGACTTGAAATCCACAGCAATGGCTCTGT
TGCCCATTTCAATGTTTCCCAAGTCACAGGACCTAGCATCTATTCTTTCCACTGTGAGTACGTCAGCAGTGTGAGCAAGA
AAGGCAATCTCCTTGTGACCAACGTGCCCTCAGTCTGGCAGATGACTCTTCATAACTTCCAGATCCAGGCCTTCAATGTG
ACTGGTGAACAGTTCTCCTATGCTAGCGACTGTGCTGGTTTCTTCTCTCCGGGCATCTGGATGGGTCTGCTCACCACCCT
CTTCATGCTTTTCATATTCACCTATGGTCTGCACATGATACTCAGCCTAAAGACCATGGATCGCTTTGATGACCACAAGG
GCCCCACCATCACTTTGACCCAGATTGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 306 .43 RPM |
| SRP007412_cerebellum | 262 .05 RPM |
| SRP007412_heart | 116 .99 RPM |
| SRP007412_kidney | 175 .15 RPM |
| SRP007412_liver | 64 .37 RPM |
| SRP007412_testis | 14 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000008869 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017631 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005317 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1198 | 76.52 | 69.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000019087 retrocopies